Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0214 ATGGCGCCAGTGACAGCGAGAAGCGCAGGCGCTGGTATCGGAACCGTAATCTTCTTCTCTCTCGCCGTCGCATATTTCTTCTGCGACCGTCGAAGCAATTCATCAAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAATCAAAGAATGGAATCATTGACGCCATTGGTAACACTCCTTTGATTCGAATCAATAGTCTCTCTGATGCCACTGGTTGCGAAATTCTTGGAAAGTGTGAGTTTTTGAATCCTGGAGGGAGTGTTAAAGATCGTGTTGCAGTTCAAATTATTGAAGAGGCTTTGGAATCTGGACAGCTACGTCCAGGTGGAATAGTTACTGAAGGGAGTGCCGGAAGCACAGCCATTAGCATTGCTACTGTTGCTCCTGCTTACGGATGCAAATGTCATGTGGTTATTCCAGACGATGCTGCCATTGAGAAGTCTCAAATAATTGAAGCCCTTGGGGCAACTGTTGAAAGAGTACGGCCGGTGTCAATCACTCACAAAGACCATTTCGTCAATATTGCAAGAAGACGGGCATCTGAAGCAAATGAGTTTGCATTAAAGCATAAAAAATCACAACCTAATGGCACAGACGCGCAGCAAATAAATGGTTATAAATCTGACGAAGACAACCATAACTCACTCTTTCCCAATGATTGTCAAGGAGGCTTCTTTGCTGATCAGTTTGAAAACCTAGCAAACCTTAGGGCCCATTACGAGGGTACAGGACCTGAGATTTGGGAACAGACAGAAGGAAAATTAGATGCATTTGTTGCAGCAGCAGGCACTGGTGGTACTGTTGCCGGTGTTTCCAAGTTTCTTCAGGAAAAGAATCCAAACATCAAGTGTTACCTCATAGATCCTCCTGGTTCTGGCTTGTTTAATAAGGTAACGAGGGGGGTAATGTACACCAAAGAGGAGGCAGAAGGACGAAGACTTAAGAATCCGTTTGACACTATAACAGAAGGAATTGGAATTAACAGGGTAACAAGGAATTTTGCAGAGGCAAAACTTGATGGAGCATTTAGAGGTACAGATATGGAGGCTGTTGAAATGGCAAGGTTTCTTGTGAAGAACGACGGGCTCTTCCTTGGGAGTTCTTCTGCAATGAACTGTGTTGGAGCAGTTAAAGTAGCGCAATCAATTGGCCCTGGTCACACAATTGTAACCATTCTTTGCGACAGCGGAATGAGACATTTGAGCAAGTTTTGTAATGCTGAATACTTGTCTCGGCTTGGTTTGACACCGAAAGCAACTGGATTAGAGTTCTTGGGTATCAAATGA 1284 0.4393 MAPVTARSAGAGIGTVIFFSLAVAYFFCDRRSNSSKNKKKKKKKKKSKNGIIDAIGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVQIIEEALESGQLRPGGIVTEGSAGSTAISIATVAPAYGCKCHVVIPDDAAIEKSQIIEALGATVERVRPVSITHKDHFVNIARRRASEANEFALKHKKSQPNGTDAQQINGYKSDEDNHNSLFPNDCQGGFFADQFENLANLRAHYEGTGPEIWEQTEGKLDAFVAAAGTGGTVAGVSKFLQEKNPNIKCYLIDPPGSGLFNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRVTRNFAEAKLDGAFRGTDMEAVEMARFLVKNDGLFLGSSSAMNCVGAVKVAQSIGPGHTIVTILCDSGMRHLSKFCNAEYLSRLGLTPKATGLEFLGIK* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0214 427 Gene3D - 85 188 IPR036052 -
Tpr4g0214 427 Gene3D - 55 84 IPR036052 -
Tpr4g0214 427 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 40 408 IPR036052 -
Tpr4g0214 427 Gene3D - 200 408 IPR036052 -
Tpr4g0214 427 Pfam Pyridoxal-phosphate dependent enzyme 53 394 IPR001926 -
Tpr4g0214 427 PANTHER CYSTEINE SYNTHASE-RELATED 33 426 - -
Tpr4g0214 427 CDD CBS_like 56 401 - -
Tpr4g0214 427 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 77 95 IPR001216 GO:0006535
Tpr4g0214 427 PANTHER CYSTATHIONINE BETA-SYNTHASE 33 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0214 Tpr-Chr4 2267815 2271786 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0214 55 401 Miscellaneous Gene Families AT3G04940 29.799 5.25e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0214 K01738 - gmx:100799081 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0214 4 2267815 2271786 Tpr4g0214 4 2267815 2271786 ECH