Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0175 ATGGCCTACGAATCTTGGGTTTTGGGTCATGGAGTTTTTTTCAATTCGGGTACTAAATTGTTTTATCCTACTCATGAGAATCGAACTAAGAGAATGCCAATGAAGGTTTTGGGTATAAACAGTAGATACCCCTTTCCTATTGTTTCAAATTGTGTTGGTCCTTTCACTTGTAAAAGCTTTCAGGTTTCAAGTTATGGAAACAATGCCAAGTTACTTAGTGGGAATAGCTTGAAGATGAAGTGTCTTGGTAGTGATAGTGATTGTTTGCATGAGAAAAATGTTGTTTCCAATGCTAATTTGAAGTTTATAAATGAAGTTTTGTTGAAAAAAGGGATTCTTTTGGCTGCTACTGTTTGTGGGGTGTTGGTGTTTGGATGTCCGAAAGTTTTCGCTGTTGAAGGTATTGTCAATGCTGGATATGGTGTTATTGGAAAGAGCATACTTTTGCTTAAGAGTACTTGGCCTACGGTGTTGCAAGTTCTTCGTTTATTTAAGGAACAAGGGTTGTTATTGGCTTTGCTTTTGGGTCTTTCGGCGTTTTTCTCTTTGGCGGAGACATCAATTACCACACTTTGGCCTTGGAAGGTTCGTGAGTTGGCTGAAAAAGAATCTGAAAATGGCGTCTTCAGACTACTCCGAAGTGATGTTACTCGATTCCTCACAACCATACTTATTGGCACAACTGTAGTAAATATCGCAGCAACTGCTCTGGTCACAGAAGCTGCAACTGCAGTATTTGGCGAAGCTGGTGTTAGTGCAGCAACAGGAGTGATGACAGTTGCCATTTTGCTTCTCACTGAAATCACTCCAAAAAGCATTGCTGTTCATAATGCCACAGAGGTGGCTCGGTTTGTGGTCAGGCCAGTGGCATGGCTTTCTCTTGTACTGTATCCCGTAGGAAGAATTGTTACCTATCTTTCAATGGGGATGCTTAAATTGCTTGGCTTAAAAGGAAGTAGTGAGCCATATGTTACTGAAGAGGAGCTAAAACTGATGCTAAGGGGTGCAGAACTAAGCGGGGCAATAGAAGAGGAAGAACAAGATATGATTGAAAATGTGTTGGAGATAAAAGACACACATGTCAGAGAAGTTATGACACCTCTTGTTGATGTTGTTGCAATCGATGCAAGTGCAAGCCTTGTAGATTTTCATCACTTGTGGGTTACACATCAGTACTCAAGGGTACCTGTTTTTGAGCAACGTGTTGATAATATAATGGGTATAGCATATGCAATGGATCTGCTGGATTATGTACAAAAGGGCGAGACGCTGGAGAGTATTACAGTTGGAGATATGGCTCATAAGCCTGCATATTTCGTACCTGATTCAATGTCTGTTTGGAATCTTCTTAGAGAGTTTCGAATCAGAAAAGTTCACATGGCTGTCGTTCTTAATGAGTACGGTGGAACTGTTGGACTTGTAACTCTTGAAGATGTTGTTGAGGAAATTGTTGGTGAAATCTTTGATGAAAATGACTCAAAGGAGGAAATACAAAAGAAAACTGGCTACATTGTGATGCGAGCTGAGGGTGTGTTTGACGTGGATGCTAACACATCCATTGATCAGCTTTCTGAAGATTTGAATATCAAGATGCCAGAGGGTCATCAATATGAGACAGTATCTGGTTTTGTATGTGAAGCCTTTGGATACATTCCAAGGACAGGTGAAAGCATCAAGATAGATCTTGAAAGGGATGACGAAGATGATGAAGATGACAACAATGGCGACCACCAGGAACCGAAAGAGAAAAAACATATTTTCAAACTTGAGATACTAGCAGGAAATGCAAGAAAGGTGAGTGCTGTTCGGTTTGAAAGGCTAAATACTGTCGACGAAATGTTGGAGGCTAAAGAAGTAACACGAATGTTCCCGAAAATTGTGAAAAGAAAATGGAACAGCGGCGAAGACTCTGAGGATGATGGAGAATATGATGGATATGCATTTGTAAAGAGACCACAGGAAGACATTTCTAATGAATATGTAGTTGATCAGGAAAATTCTCTTAGAAATTCATAA 2016 0.4018 MAYESWVLGHGVFFNSGTKLFYPTHENRTKRMPMKVLGINSRYPFPIVSNCVGPFTCKSFQVSSYGNNAKLLSGNSLKMKCLGSDSDCLHEKNVVSNANLKFINEVLLKKGILLAATVCGVLVFGCPKVFAVEGIVNAGYGVIGKSILLLKSTWPTVLQVLRLFKEQGLLLALLLGLSAFFSLAETSITTLWPWKVRELAEKESENGVFRLLRSDVTRFLTTILIGTTVVNIAATALVTEAATAVFGEAGVSAATGVMTVAILLLTEITPKSIAVHNATEVARFVVRPVAWLSLVLYPVGRIVTYLSMGMLKLLGLKGSSEPYVTEEELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASASLVDFHHLWVTHQYSRVPVFEQRVDNIMGIAYAMDLLDYVQKGETLESITVGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGLVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRAEGVFDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGESIKIDLERDDEDDEDDNNGDHQEPKEKKHIFKLEILAGNARKVSAVRFERLNTVDEMLEAKEVTRMFPKIVKRKWNSGEDSEDDGEYDGYAFVKRPQEDISNEYVVDQENSLRNS* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0175 671 Gene3D - 502 604 IPR016169 -
Tpr4g0175 671 ProSiteProfiles CNNM transmembrane domain profile. 160 346 IPR002550 -
Tpr4g0175 671 SUPERFAMILY CBS-domain pair 348 487 IPR046342 -
Tpr4g0175 671 Pfam Cyclin M transmembrane N-terminal domain 170 346 IPR002550 -
Tpr4g0175 671 MobiDBLite consensus disorder prediction 559 582 - -
Tpr4g0175 671 PANTHER HEMOLYSIN-RELATED 84 659 - -
Tpr4g0175 671 ProSiteProfiles CBS domain profile. 365 424 IPR000644 -
Tpr4g0175 671 Pfam Transporter associated domain 506 607 IPR005170 -
Tpr4g0175 671 ProSiteProfiles CBS domain profile. 432 490 IPR000644 -
Tpr4g0175 671 SUPERFAMILY FAD-binding/transporter-associated domain-like 503 610 IPR036318 GO:0050660
Tpr4g0175 671 SMART CorC_HlyC_2 505 608 IPR005170 -
Tpr4g0175 671 Gene3D - 340 495 IPR046342 -
Tpr4g0175 671 Pfam CBS domain 429 484 IPR000644 -
Tpr4g0175 671 Pfam CBS domain 361 419 IPR000644 -
Tpr4g0175 671 CDD CBS_pair_CorC_HlyC_assoc 360 481 IPR044751 -
Tpr4g0175 671 PANTHER BNAC03G73630D PROTEIN 84 659 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0175 - - mtr:MTR_5g094740 1158.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0175 4 1929642 1936414 Tpr4g0175 4 1929642 1936414 ECH