Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0124 ATGTGGAAACCACGCGCTTTCTCCGTTTCACTTGCTCTACTTCTTCTTCATTCACTTTTTCTAGCTCTTGTTTCTGCTCAAACTAAGAGATCTGAATGGAACACACTCTCAGGAAGTCCACCATTGGTCATAGCACATGGTGGTTTTTCAGGTATATTTCCCGATTCTAGTGATGCTGCTTATATTTTAGCCACAGCAGTGAGCGTACCGAATGTCGCTCTATGGTGTGATGTTCAATTGACAAAAGATAGAGTTGGGATTTGCCTTCCAAATATCAACCTTGAAAACTCTACTTACATTGCAAGTATTTTCCAAAATCAAAGTGTGAATTACTTGGTTAATGATGTACCCACCAACGGCTATTTTTCTGTGGATTACACCTTAAAGGACTTATCCAACGTCATTTTATCTCAGGGAGTATACTCTCGGTCTCCCCTGTTCGATGGCACTGGTTATGTCATTAATACCGTCGAAGATGTACTCAAAATAGTGGCCCCACAAACACCTGGTTTGTGGTTGAATATTCAGCATGATGCTTTCTACACGCAACACAATTTAAGCATGAGAAGTTATGTACTCTCAGTTTCTAGAAAAGTGCATATCAATTATATCTCATCACCCGAGGTTGGTTTTCTGAGAAGTATTACAAAACGTTTCAACCCAAAAATAACAAAACTTGTCCTCAGGTTTCTCAATCCAGATGACACAGACCCATCAACCAATCAGAGTTATAGTTCATTACTAAAAAATCTTACGTTTATCAAGACTTTTGCTTCTGGAATTATTGTTCCAAAGGGTTACATTTGGCCTATAGATGCTAGTCTTTATCTACAACCACATACCTCTTTGGTTTCCGATGCACATAAAGCGGGGTTGGAAGTATATGCATCAGATTTTGCAAATGATGTTATGTCTAGCTATAATTATAGTTATGATCCTCTTACTGAGTACCTGCAATTCATTGATAATGGCGACTTCTCCGTTGATGGTGTGCTGACCGATTTTCCCATAACTCCATCTGCAGCTATAGATTGCTTTGCTCACCAAGGCACGAATGCTACAAGAAGAGATAACACTTTGATTATCTCACAATTTGGAGCAAGTGGAGATTATCCAGCTTGTACTGACAAAGCATATAACAAGGCCATAACAGATGGTGTGGATGTTCTTGACTGTCCTGTTCAATTCTCAAAGGATGGAACACCCTTTTGCTTAAACTCCATTGATCTTCTAGAGAGTACCACAGTTGCTCAAACAAGCTTCAGTGATTTAGCTTTGAATATCCCTCAGATCAAATCTGGTCGTGGCATATTTACATTTAACTTGTCGTGGACTGATATAAAAGGCCTGACCCCCTCAATTTTGAACCCTTTCTCAAAATACACACTGTTCAGGAATCCAAAAAATAAGAACGCGGGGACACTTCTAACATTATCAGATTTCTTGTCATTGACTAAAAATCAGACTTCTCTATCAGGCATCCTGATCGTCATTGAGAATGCAGCCTATCTTGCGGAAAAGCAGCAAATAAGTGTAACTGATGTCGTCATTGAGGCTTTGAGAAATGCAGGTTATGATAAACCGGGAAGTCAAAAAGTTTATATTCAATCCACTAATAGCTCTGTACTTCTGAAGTTCAAGGAGAAAACCAAATACGAGCTTGTCTACAAGATTGACGAGACTGTCGGTGATGCTGTCAAAGCAGCTGTTGAGGATATAAAAACATTTGCAAGTTCTGTGGTTATCAGTAAAGACTCAGTATTTCCTCGTAACACCGGCTTCCTAACCACCTTTACAAACATTGTGCCAAAGCTAAAAGCTGCTAACCTCTCAGTTTTCGTAGAAATATTCAACAATGAGTTTGTATCTCAGGCATGGGATTACTTCTCGGATCCAACAGTGGAGATCAACTCATATATTCAGGAAGCAGAAATTAAAGGAGTCATCACACCCTTCCCTAAAACTGCTAGTAGATACTCAAGAAACAAATGTTTGTTGGGTAATAAGGCACCTCCTTACATGCAACCTGTTCAAGCCGGTAGTCTTCTTGGAACCGTTAACAATCAGTCATTGCCTCCAGCTCTGGCTCCACTCCCTCCCTTAACTAAAGCCGAAGTGGTAGAGTCACCTTTGCCTTCTGTTGATAAACTAGCTCCAGCTTCTAGCCCTGCTGCCGGAACCAAGTCTCCACCCGGAAATGCGCAGCCTAAGGTTTCTGTTTGCTTATTCTTGTCCAGTCTCGCTGTGTTTGTAGCTTCTATTCTTCTGCTTTGA 2274 0.4046 MWKPRAFSVSLALLLLHSLFLALVSAQTKRSEWNTLSGSPPLVIAHGGFSGIFPDSSDAAYILATAVSVPNVALWCDVQLTKDRVGICLPNINLENSTYIASIFQNQSVNYLVNDVPTNGYFSVDYTLKDLSNVILSQGVYSRSPLFDGTGYVINTVEDVLKIVAPQTPGLWLNIQHDAFYTQHNLSMRSYVLSVSRKVHINYISSPEVGFLRSITKRFNPKITKLVLRFLNPDDTDPSTNQSYSSLLKNLTFIKTFASGIIVPKGYIWPIDASLYLQPHTSLVSDAHKAGLEVYASDFANDVMSSYNYSYDPLTEYLQFIDNGDFSVDGVLTDFPITPSAAIDCFAHQGTNATRRDNTLIISQFGASGDYPACTDKAYNKAITDGVDVLDCPVQFSKDGTPFCLNSIDLLESTTVAQTSFSDLALNIPQIKSGRGIFTFNLSWTDIKGLTPSILNPFSKYTLFRNPKNKNAGTLLTLSDFLSLTKNQTSLSGILIVIENAAYLAEKQQISVTDVVIEALRNAGYDKPGSQKVYIQSTNSSVLLKFKEKTKYELVYKIDETVGDAVKAAVEDIKTFASSVVISKDSVFPRNTGFLTTFTNIVPKLKAANLSVFVEIFNNEFVSQAWDYFSDPTVEINSYIQEAEIKGVITPFPKTASRYSRNKCLLGNKAPPYMQPVQAGSLLGTVNNQSLPPALAPLPPLTKAEVVESPLPSVDKLAPASSPAAGTKSPPGNAQPKVSVCLFLSSLAVFVASILLL* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0124 757 ProSiteProfiles GP-PDE domain profile. 41 343 IPR030395 GO:0006629|GO:0008081
Tpr4g0124 757 Pfam Glycerophosphoryl diester phosphodiesterase family 46 337 IPR030395 GO:0006629|GO:0008081
Tpr4g0124 757 Pfam Glycerophosphoryl diester phosphodiesterase family 366 654 IPR030395 GO:0006629|GO:0008081
Tpr4g0124 757 CDD GDPD_SHV3_repeat_1 41 342 - -
Tpr4g0124 757 SUPERFAMILY PLC-like phosphodiesterases 358 659 IPR017946 GO:0006629|GO:0008081
Tpr4g0124 757 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 14 756 - -
Tpr4g0124 757 CDD GDPD_SHV3_repeat_2 360 659 - -
Tpr4g0124 757 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 14 756 - -
Tpr4g0124 757 Gene3D Phosphatidylinositol (PI) phosphodiesterase 357 659 IPR017946 GO:0006629|GO:0008081
Tpr4g0124 757 Gene3D Phosphatidylinositol (PI) phosphodiesterase 40 341 IPR017946 GO:0006629|GO:0008081
Tpr4g0124 757 SUPERFAMILY PLC-like phosphodiesterases 40 341 IPR017946 GO:0006629|GO:0008081
Tpr4g0124 757 ProSiteProfiles GP-PDE domain profile. 359 660 IPR030395 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0124 Tpr-Chr4 1445671 1450527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0124 5 757 Receptor kinase-like Gene Family AT4G26690 54.233 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0124 - - gmx:100792750 1110.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0124 4 1445671 1450527 Tpr4g0124 4 1445671 1450527 ECH