Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0115 ATGGCTACTCTTCTTCCTTCTTCCCTCACAAACCCAAATAAGCTTCTCTCACATTCTTCCCATTTCCACAATGCATCATTATCCACTTCACCTTCTTCTGTTCTTCACCCCAAAACGCAACGTTTTACTCGTCGTTTTGGGTCTGTTAGATGCTCTTTAGCTTATGTTGATAATGCTAAGATTAAGGTCGTTGGAATTGGGGGTGGTGGTAACAATGCCGTTAACCGCATGATTGGTAGTGGTTTGCAAGGTGTAGACTTCTATGCAATAAATACTGATGCTCAAGCACTATTGCATTCTGCTGCCGAGAACCCTATTAAAATTGGAGAGCTTCTGACTCGTGGATTAGGTACTGGTGGGAATCCGCTTTTAGGAGAACAAGCCGCGGAGGAGTCAAAAGAAGCTATTGCTAATGCCCTTAAAGGATCGGATTTGGTGTTTATAACAGCTGGGATGGGTGGGGGTACAGGGTCTGGTGCTGCCCCAGTTGTGGCCCAAATATCAAAAGAGGCAGGTTACTTGACTGTAGGTGTTGTTACCTATCCTTTCAGTTTTGAAGGACGTAAAAGATCCTTACAGGCACTTGAAGCCATTGAAAAACTTCAGAAAAATGTTGATACACTTATTGTGATTCCAAATGACCGTTTGCTTGACATAGCTGATGAGCAGATGCCCCTTCAAGATGCTTTTTGTCTTGCAGATGATGTTTTACGCCAAGGAGTTCAGGGAATTTCGGACATTATAACAATACCTGGACTTGTGAATGTGGATTTTGCTGATGTAAAAGCTGTAATGAAAGACTCTGGTACTGCAATGCTCGGGGTAGGTGTTTCATCCGGTAAAAACCGAGCAGAAGAAGCAGCAGAACAGGCTACTTTGGCCCCTTTAATTGGATCTTCTATTCAATCAGCCACTGGGGTAGTGTATAATATTACTGGAGGAAAGGACATTACCCTGCAGGAAGTCAACAGGGTATCTCAGGTTGTGACTAGTTTGGCTGATCCTTCAGCCAATATTATATTTGGAGCCGTTGTTGATGATCGTTACACCGGTGAGATTCATGTGACTATCATTGCCACTGGCTTTTCGCAATCTTTTCAGAAGAAGCTGCTAACAGACCCAAGGGCTGCAAAACTTCTTGACAAAGTGGCTGAGGGAAAAGAAACCAAGTCAGTGCCCTCTCCCCTCAAATCCTCAAACTTATCTTCCAAAGTTGAATCTAGAGCACCACCCGCACGAAAGCTCTTTTTTTAG 1254 0.437 MATLLPSSLTNPNKLLSHSSHFHNASLSTSPSSVLHPKTQRFTRRFGSVRCSLAYVDNAKIKVVGIGGGGNNAVNRMIGSGLQGVDFYAINTDAQALLHSAAENPIKIGELLTRGLGTGGNPLLGEQAAEESKEAIANALKGSDLVFITAGMGGGTGSGAAPVVAQISKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDIADEQMPLQDAFCLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSGKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYTGEIHVTIIATGFSQSFQKKLLTDPRAAKLLDKVAEGKETKSVPSPLKSSNLSSKVESRAPPARKLFF* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0115 417 Hamap Cell division protein FtsZ [ftsZ]. 56 386 IPR000158 GO:0003924|GO:0005525
Tpr4g0115 417 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 1 417 - -
Tpr4g0115 417 Gene3D - 268 375 IPR037103 -
Tpr4g0115 417 ProSitePatterns FtsZ protein signature 2. 144 165 IPR020805 GO:0005525
Tpr4g0115 417 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 153 159 IPR017975 GO:0005525|GO:0005874|GO:0007017
Tpr4g0115 417 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1 417 IPR045061 GO:0003924|GO:0005525
Tpr4g0115 417 MobiDBLite consensus disorder prediction 384 417 - -
Tpr4g0115 417 SMART Tubulin_4 60 252 IPR003008 GO:0005525
Tpr4g0115 417 SUPERFAMILY Tubulin nucleotide-binding domain-like 59 255 IPR036525 -
Tpr4g0115 417 Pfam FtsZ family, C-terminal domain 269 362 IPR024757 -
Tpr4g0115 417 Pfam Tubulin/FtsZ family, GTPase domain 60 220 IPR003008 GO:0005525
Tpr4g0115 417 PRINTS Cell division protein FtsZ signature 145 165 IPR003008 GO:0005525
Tpr4g0115 417 PRINTS Cell division protein FtsZ signature 173 194 IPR003008 GO:0005525
Tpr4g0115 417 PRINTS Cell division protein FtsZ signature 236 258 IPR003008 GO:0005525
Tpr4g0115 417 PRINTS Cell division protein FtsZ signature 259 280 IPR003008 GO:0005525
Tpr4g0115 417 SUPERFAMILY Tubulin C-terminal domain-like 254 370 IPR008280 -
Tpr4g0115 417 SMART Tubulin_C_4 254 371 IPR018316 -
Tpr4g0115 417 Gene3D Tubulin/FtsZ, GTPase domain 54 267 IPR036525 -
Tpr4g0115 417 MobiDBLite consensus disorder prediction 392 406 - -
Tpr4g0115 417 TIGRFAM ftsZ: cell division protein FtsZ 57 371 IPR000158 GO:0003924|GO:0005525
Tpr4g0115 417 CDD FtsZ_type1 73 361 IPR000158 GO:0003924|GO:0005525
Tpr4g0115 417 ProSitePatterns FtsZ protein signature 1. 91 125 IPR020805 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0115 Tpr-Chr4 1385864 1388718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0115 K03531 - gmx:100808722 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0115 4 1385864 1388718 Tpr4g0115 4 1385864 1388718 ECH