Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0103 ATGGCTGTAACTGAAGCTCAAAACCCGCTTATTGGAGATAACACATGTGGTTCCTTGTTGAAGAAGCTGCAGGAAATATGGGATGAGGTTGGTGAAAGCGACGAGGAACGAGACAAAATGCTTCTTCAGTTAGAGCAGGAGTGTTTGGATGTGTACAAGAGAAAGGTTGAGCATGCTGCAAAGTCGAGGGCACAGCTACTTCAAGCCTTGTCTGATGCTAAGATTGAGCTTTCTACTCTTCTATCGGCACTTGGAGAAAAGAGCTTTGCCGGAATTCCTGATAATACTTCTGGAACTATCAAGGAACAGCTTGCAGCTATAGCACCAGCACTTGAACAGTTATGGCAACAAAAGGAAGAAAGAATAAAGGACTTCGCAGATGTACAGTCACAGATCCAAAAAATATGTGGAGAGATAACTGGAAGCTCGAACGTTAATGATGTACCTGTAGTTGATGAGTCTGACCTGACTCTAAAGAAGTTTGAGGAATATCAATCTGAGCTTCAAGAACTTCAAAAGGAAAAGAGTGACAGGTTGCAAAAGGTTTTTGAATTTGTGAGTACTGTGCATGATCTATGTGCTGTCCTTGGTATGGACTTCTTCAGTACCGTAACTGAGGTTCATCCAAGCCTGAATGATTCTACTGGTGGTCAATCCAAAAGCATAAGCAATGAAACCCTAGCTAGGCTTGCCAACACAGTCTTGACACTGAAAGAAGATAAAAAGCAGAGGCTGCACAAGCTCCAAGAATTGGCTTCTCAGTTAATTGATCTGTGGAATCTAATGGATACTCCTCCAGAGGAAAGGAAACTGTTTGACCATGTTACTTGTAATATCTCAGCTTCTGTTGATGAAGTCACTATTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGGCTGAGGTTGAAGTTGAGAGACTGGACCAGCTTAAAGCAAGCAGGATGAAGGAAATTGCTTTCAAGAAGCAAGCAGAACTCGAAGAGATATTTGCCCATGCTCATATAGAAATAGATCCGGAGGCTGCAAGAGAGAAGATTATGGCATTGATTGATTCTGGAGATATTGAACCGACTGAATTACTCGCTGACATGGACAATCAAATAGGAAAAGCAAAAGAAGAAGCATTAAGCCGGAAAGATATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAGGACTACAATCGGGATGAGAACAGGTATAATGCAAGCAGAGGTGCACACTTAAACCTCAAACGAGCAGAGAAAGCTCGGATACTGGTAAATAAAATTCCCGCTTTGGTTGATACATTGGTTGCTAAAACACGTGCATGGGAAGAGACTCATGATATGTCATTCACATATGATGGTGTTCCTCTTTTAGCCATGTTAGATGAATATGCCATGCTTAGGCATGAACGGGAAGAAGAAAAACGAAGAATGAGGGACCAGAAGAAATTTCAGGAGCAACAGAGCACAGAACCGGAAGCCCCCTTTGGTTCAAGACCCAGCCCTGCTAGGCCAGTTAGTGCTGCTAAGAAGGTAGGTGGCCCTCGTGCTAATGGAGCCAACGGTACTCCTAACCGACGGCTATCACTTAATGCTCATCAAAATGGAAGCAGGTCCATAGCAAAAGATGGAAAAAGGGATAACACTAGACCAGTTGCTCCTGTGAATTATGTGGCTATATCAAAAGAAGATGCTGCATCCCACGTATCTGGGACCGAACCCATCCCAGCATCACCCTAA 1749 0.4351 MAVTEAQNPLIGDNTCGSLLKKLQEIWDEVGESDEERDKMLLQLEQECLDVYKRKVEHAAKSRAQLLQALSDAKIELSTLLSALGEKSFAGIPDNTSGTIKEQLAAIAPALEQLWQQKEERIKDFADVQSQIQKICGEITGSSNVNDVPVVDESDLTLKKFEEYQSELQELQKEKSDRLQKVFEFVSTVHDLCAVLGMDFFSTVTEVHPSLNDSTGGQSKSISNETLARLANTVLTLKEDKKQRLHKLQELASQLIDLWNLMDTPPEERKLFDHVTCNISASVDEVTIPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQAELEEIFAHAHIEIDPEAAREKIMALIDSGDIEPTELLADMDNQIGKAKEEALSRKDILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRAWEETHDMSFTYDGVPLLAMLDEYAMLRHEREEEKRRMRDQKKFQEQQSTEPEAPFGSRPSPARPVSAAKKVGGPRANGANGTPNRRLSLNAHQNGSRSIAKDGKRDNTRPVAPVNYVAISKEDAASHVSGTEPIPASP* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0103 582 Coils Coil 238 258 - -
Tpr4g0103 582 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 5 582 IPR007145 GO:0000226|GO:0008017
Tpr4g0103 582 Gene3D - 368 501 - -
Tpr4g0103 582 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 1 5 582 - -
Tpr4g0103 582 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 506 - -
Tpr4g0103 582 Coils Coil 297 317 - -
Tpr4g0103 582 Coils Coil 460 491 - -
Tpr4g0103 582 MobiDBLite consensus disorder prediction 475 582 - -
Tpr4g0103 582 Coils Coil 154 181 - -
Tpr4g0103 582 MobiDBLite consensus disorder prediction 475 490 - -
Tpr4g0103 582 MobiDBLite consensus disorder prediction 525 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0103 Tpr-Chr4 1212293 1216635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0103 13 547 EF-hand Containing Proteins AT5G62250 42.336 4.61e-127 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0103 K16732 - gmx:100806071 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0103 4 1212293 1216635 Tpr4g0103 4 1212293 1216635 ECH