Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0102 ATGAGAGATTCGAGTGCGGATAATAGTTGTAGTTCACCAAGAACGCCAAATCTTCGTCAAAGAAGACGTTCAAATGAGATTCCTCCTGAAATACTCAAATCAAACGGAACCATTTTACTCGTAAATGATAAATTTAAATACAAATCAATGTGGATTCGTGCATATTCTTCTCTATGGATGCTAGCATTTGTCTCACTTATCATATACATGGGTCATCTTTACATCTGGGCCATGATTGTTGTCATCCAAATATTTATGGCTAGTGAGCTCTTCAATCTATTGAGAAGAGCTAATCAAGATAAACGTCTCCCTAAGTTTAAGCTCTTGAATTGGCATTTTTTCTTCACGGCGATGCTATATGTTTATGGCCGTATTCTCAGTCAACACCTTGTGAATACAGTGACATCGGAGAAAATTTTCTATAGGCTCGTCAGTAACCTCATCAAGTATCAGATGGTTATATGTTACTTCCTATATATTGCAGGTTTCGTATGGTTTATTCTTTCATTAAAGAAAAGATACTACAAATATCAATTTGGCCAGTATGCATGGACACATATGATACTTATTGTCGTGTTTACGCAATCTGCATTCACGGTAGCTAATATATTTCAAGGAATTTTCTGGTTTCTTTTCCCTGCGTTGCTTATTGCTATGAATGATGTTGCTGCGTATTTCTTTGGTTTCTTCTTTGGAAAAACACCTCTGATCAAATTATCTCCAAAGAAAACATGGGAAGGTTTTATTGGAGCATCTGTTGCAACTATGATCGCTGCATTTACGTTCGCAAACTTTCTAGGTCGCTTCCAGTGGCTAACATGTCCAAGGAAGGATTTATCAACAGGTTGGCTTGAGTGTGACCCTGACCCTATTTTTAAGCCAGAGTACATTCCAATGCCAGAATTTATTTCTCATTGGATACCTGAGAAAGAGATAGCGGTTTTGCCAGTACAATGGCATGCCTTATGGCTAGGACTATTTGCGTCTATCATAGCACCGTTCGGAGGATTTTTTGCTAGCGGTTTTAAGAGAGCTTTTAAAATCAAGGACTTTGGTGACAGTATACCTGGACATGGTGGATTCACTGACAGAATGGATTGCCAGATGGTGATGGCTGTTTTTGTTTACATTTATCATCAGTCATTTGTTGTCCAACATGACTATTCCATTGATGTGCTTTTGGACCAGATAATGCGGGATCTTGGTTTTGAGGAACAGCTAGCTCTTTACACAAAACTTGGGCAGATATTACAAGAAAGGCAATTAATGCATATATGA 1278 0.3811 MRDSSADNSCSSPRTPNLRQRRRSNEIPPEILKSNGTILLVNDKFKYKSMWIRAYSSLWMLAFVSLIIYMGHLYIWAMIVVIQIFMASELFNLLRRANQDKRLPKFKLLNWHFFFTAMLYVYGRILSQHLVNTVTSEKIFYRLVSNLIKYQMVICYFLYIAGFVWFILSLKKRYYKYQFGQYAWTHMILIVVFTQSAFTVANIFQGIFWFLFPALLIAMNDVAAYFFGFFFGKTPLIKLSPKKTWEGFIGASVATMIAAFTFANFLGRFQWLTCPRKDLSTGWLECDPDPIFKPEYIPMPEFISHWIPEKEIAVLPVQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFVYIYHQSFVVQHDYSIDVLLDQIMRDLGFEEQLALYTKLGQILQERQLMHI* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0102 425 Pfam Cytidylyltransferase family 52 382 - -
Tpr4g0102 425 PIRSF CDP-DAG_synth_e 2 425 IPR016720 GO:0004605
Tpr4g0102 425 ProSitePatterns Phosphatidate cytidylyltransferase signature. 340 366 IPR000374 GO:0016020|GO:0016772
Tpr4g0102 425 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 3 7 423 - -
Tpr4g0102 425 MobiDBLite consensus disorder prediction 1 22 - -
Tpr4g0102 425 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 7 423 IPR016720 GO:0004605
Tpr4g0102 425 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0102 Tpr-Chr4 1202878 1205999 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0102 2 420 Lipid Metabolism Gene Families AT4G26770 72.854 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0102 K00981 - gmx:100805363 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0102 4 1202878 1205999 Tpr4g0102 4 1202878 1205999 ECH