Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0101 ATGGAACTCTGTACTCATACCTTCAAAACTTCTCTCTTTTTCAACCCTTCTTTCTCTCTTCCTTCTTCTTCTTCTTCTTCAAATTCTCATCTTCTTCGTTTCAACAATACTCTTAAACCCTTCAAATTCAGTTCCTTCAATCTCTCATCTTTCATTCAACCTTCTCTTTATCATCATACTTCTTCTCCATTCACTATTTCAGCTTCTTCTTCTTCAGTTGAACTTTTCTCAGAAAATGATCGTCTTCCAGCTGAATTGAAGGTTTCTGAAACAACAGAATCCAATTCCAGAGTTAGATTGCATGTGGAGGTGCCACCAATAGTATGCAAGGACTGTTACGAAAGGGTCCTAGTTGAGTTTACGAAGCAGGCAAAGATATCTGGATTCCGTCCTGGAAAACCGGTCCCGGAAAGTATTCTTCTTAGTTATGTGGGGATTAAAAACGTTCAAAAGGCTGTGATTGAATCAATATTGAGGAGGACACTTTCACACGCTGTGACAACGGTTACTGGAAGGGCTTTGCAGGACTCCGTACGTATAGTTACTAAATTTTCTGAGATGGAGGGAACATATTCTTCTCACGGGCTTCTTAGATATGAAGTCATTGTTGATGTTGCGCCAGAAATCAAATGGATTTCTGATGATGCATACAAAAATTTGAAGGTTGTGGTTGAGATAGACAATGAAATAGATGCTCACATAGCATCTGAAAAAGAATTTAGAAGGCGGTACAAGTCTGCCGGTGTACTGAAAGTTGTTACTGATAGAGGACTACAGATTGGTGATGTTGTTGTACTTGACATCTCAGCAACAACCATTGATCAAGATGAATCAAATATCAAAAGTATTCCTTCAGCTGAAAGTAAAGGATTTAATTTTGATACAGATGATAGTGAAATATTAGTACCAGGTTTCCTTGATTCTATAATTGGAATAAGTCGAGGTGAAACAAAGTCATTCCCCATTGTTTTTCCGGAAACTTGGAAGCAGGAAAATCTCTGCGGTGTTCATGCTCAGTTTACTGTTGAGTGCAAAGAACTTTTTTACAGAGATTTACCAGAGCTGGATGATTCTATTGCTGATAAGCTTATCCCTGGATGCACCACAGTGGAAGAGGTCAAAGAGTTATTGTTACATAGATTCCAAGAGATAGAGCAAACAGCTAGGGAACAAGCAACCGATAATGCTATATTAGATCATATTTCTAAGATGGTAGAAGTTGATATACCTCCATCCTTGTTTGAGGAACAAGGTAGACAGCTTTATGGATCCAGCCTATTAGAAATGCAGACAAAAATAAAACTAAATGAGCAGCAGCTAGCTACTCTATCAAGTCCAAAGGCCGTGAATGAATATCTTGAGCATCATAGGGAAAATATAAAAAATTTAATCAAACAGAACCTGGCAGTTGGTGACATATATAGGCGTGAAAATCTGCAGCTTCCTACCGAAGACATTGTGAAAGAGGTTGAGAATTCCATTGCTGAATTCAAACGTCAACAACAAGAGTATGATGAGGAGCGGGTAAAAGAACAGGTTCAAGAAATACTAGAAGGAGCTAAGGTGCTTGAATGGTTGAAAGAACGTGCAGAGATTCAGTATATAACAAGATGA 1614 0.3835 MELCTHTFKTSLFFNPSFSLPSSSSSSNSHLLRFNNTLKPFKFSSFNLSSFIQPSLYHHTSSPFTISASSSSVELFSENDRLPAELKVSETTESNSRVRLHVEVPPIVCKDCYERVLVEFTKQAKISGFRPGKPVPESILLSYVGIKNVQKAVIESILRRTLSHAVTTVTGRALQDSVRIVTKFSEMEGTYSSHGLLRYEVIVDVAPEIKWISDDAYKNLKVVVEIDNEIDAHIASEKEFRRRYKSAGVLKVVTDRGLQIGDVVVLDISATTIDQDESNIKSIPSAESKGFNFDTDDSEILVPGFLDSIIGISRGETKSFPIVFPETWKQENLCGVHAQFTVECKELFYRDLPELDDSIADKLIPGCTTVEEVKELLLHRFQEIEQTAREQATDNAILDHISKMVEVDIPPSLFEEQGRQLYGSSLLEMQTKIKLNEQQLATLSSPKAVNEYLEHHRENIKNLIKQNLAVGDIYRRENLQLPTEDIVKEVENSIAEFKRQQQEYDEERVKEQVQEILEGAKVLEWLKERAEIQYITR* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0101 537 Pfam Bacterial trigger factor protein (TF) C-terminus 369 528 IPR008880 GO:0006457|GO:0015031
Tpr4g0101 537 Gene3D - 246 353 IPR046357 GO:0003755
Tpr4g0101 537 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 355 533 IPR027304 -
Tpr4g0101 537 SUPERFAMILY FKBP-like 250 356 - -
Tpr4g0101 537 Hamap Trigger factor [tig]. 86 533 IPR005215 GO:0015031
Tpr4g0101 537 SUPERFAMILY Trigger factor ribosome-binding domain 86 224 IPR036611 GO:0006457|GO:0015031
Tpr4g0101 537 Pfam Bacterial trigger factor protein (TF) 87 231 IPR008881 GO:0006457|GO:0015031
Tpr4g0101 537 Gene3D - 216 532 IPR037041 GO:0006457|GO:0015031
Tpr4g0101 537 PANTHER TRIGGER FACTOR-LIKE PROTEIN TIG, CHLOROPLASTIC 70 536 - -
Tpr4g0101 537 TIGRFAM tig: trigger factor 97 526 IPR005215 GO:0015031
Tpr4g0101 537 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 70 536 IPR005215 GO:0015031
Tpr4g0101 537 Gene3D - 84 209 IPR036611 GO:0006457|GO:0015031
Tpr4g0101 537 Coils Coil 487 507 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0101 K03545 - gmx:100812597 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0101 4 1197177 1202771 Tpr4g0101 4 1197177 1202771 ECH