Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0095 ATGTTCTTCTACAAGCTTTTCTCCCGTTTCTCAACAACCATTTCCCGAACCTCACTTCTCTCTACTCAGCGAATTCCCCAACAACAATTCCATAACTTCTCCAATCAATTTCATTCCCTAATCATTCCTCAATCTACCAACAAGCTAATTCCATTTCAAGTCGATTTCTTATGTCCATCTATAAATTCCTCAACCCCAAAATTTGGATTTTCTTCATCAGCCTCAACTGAAACAGAAGATAAAAAAGGGAATAATGTGCATAATGGTGATTCCATAAATGATGATCCTGCAAAAACAAGTGAACAGGCAAAGGAAATTGATCAGCCAGGACAAGCCAAGCCTGCAGATCAAACAGAAGAATCAGGAGGATCTATTTCAGATTCTCAATCTCAAACTGTCAAAAGAAGGAGAGGTGTTAAACGAACTGCATTTTCTGATTCAGATTCAGAGAGTGAATCGGATTTATCCAGGGATGATTTGATTAAGCGTGTAGCCGAGAAGGAAGAACTTTTGAAATTGAAGCAAAAAGAGATTGAGAAAATACAGGATAAATTTCTGCGGGCTTATGCAGAGATGGAGAATGTCATGAACAGGACTCAACGTGAAGCAGAGAATTCAAAGAAATTTGCTATACAGAATTTTGCAAAGAGTTTACTTGATGTTGCGGATAACTTAGGAAGAGCTTCATCAGTTGTAAAGGAAAGTTTTTCCAAAATCGATACATCGAGTGACTCTGCTGAAGCAGTGAAACTACTGAAGACACTTCTTGAAGGAGTTGAAATGACCGAGAAACAACTTTCAGAGGTGCTTAAAAAGTTTGGAGTAGAAAAATTTGACCCTACAAATGAGCCCTTTGATCCACATAGGCACAATGCAGTCTTCCAAGTACCTGATGATTCCAAGCCCCCAGGCACTGTTGCAGCTGTGCTGAAGGCAGGATATTTGCTTCATGATCGTGTAATTCGGCCGGCGGAAGTTGGTGTAACCCAAGCAAAAGAAGATAACAATCCAGCAGAATGA 1020 0.3971 MFFYKLFSRFSTTISRTSLLSTQRIPQQQFHNFSNQFHSLIIPQSTNKLIPFQVDFLCPSINSSTPKFGFSSSASTETEDKKGNNVHNGDSINDDPAKTSEQAKEIDQPGQAKPADQTEESGGSISDSQSQTVKRRRGVKRTAFSDSDSESESDLSRDDLIKRVAEKEELLKLKQKEIEKIQDKFLRAYAEMENVMNRTQREAENSKKFAIQNFAKSLLDVADNLGRASSVVKESFSKIDTSSDSAEAVKLLKTLLEGVEMTEKQLSEVLKKFGVEKFDPTNEPFDPHRHNAVFQVPDDSKPPGTVAAVLKAGYLLHDRVIRPAEVGVTQAKEDNNPAE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0095 339 Coils Coil 157 184 - -
Tpr4g0095 339 CDD GrpE 179 328 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr4g0095 339 ProSitePatterns grpE protein signature. 285 328 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr4g0095 339 Gene3D - 158 273 IPR013805 -
Tpr4g0095 339 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 164 274 IPR013805 -
Tpr4g0095 339 Hamap Protein GrpE [grpE]. 100 330 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr4g0095 339 MobiDBLite consensus disorder prediction 139 157 - -
Tpr4g0095 339 MobiDBLite consensus disorder prediction 114 132 - -
Tpr4g0095 339 Pfam GrpE 163 329 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr4g0095 339 PANTHER GRPE PROTEIN 12 103 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr4g0095 339 PANTHER GRPE PROTEIN 131 331 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr4g0095 339 PRINTS GrpE protein signature 186 202 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr4g0095 339 PRINTS GrpE protein signature 282 297 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr4g0095 339 PRINTS GrpE protein signature 309 328 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Tpr4g0095 339 Gene3D Head domain of nucleotide exchange factor GrpE 274 330 IPR009012 GO:0006457
Tpr4g0095 339 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 275 331 IPR009012 GO:0006457
Tpr4g0095 339 PANTHER GRPE PROTEIN HOMOLOG 12 103 - -
Tpr4g0095 339 PANTHER GRPE PROTEIN HOMOLOG 131 331 - -
Tpr4g0095 339 MobiDBLite consensus disorder prediction 68 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0095 Tpr-Chr4 1143256 1146797 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0095 K03687 - gmx:100803396 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0095 4 1143256 1146797 Tpr4g0095 4 1143256 1146797 ECH