Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0067 ATGGAGTTGGAGTTCGATCCGATCCCAATCGGTTCGTGCTCCAAAGAGCATCACAACATTTACCAGCAATGGTTCAATTTCGCTGATTCAGATAGTGATGGACGCATGACGGGGAATGATGCCACCAAGTTTTTCGCTATGTCTAATTTGTCCCGTCAAGATCTTAAACAGGTGTGGGCTATTGCAGATTCAAAGCGACAAGGTTATCTAGGTTTCCAAGAGTTTATCATTGCTATGCAGGTAGTTTCTTTGGCACAATCTGGACACCCAATAACACATGATCTGCTGAATAGTGATGTTGATTTGAAAAATCTGAAACCTCCCATAATGGAGGGTTTGGATGTATTACTAGCTAAAAAAAAGCATAAACAAAAAGACACTGATGTAAATGGTAGTCCTCAGTTACAGCTATCACCATCAAGCAGTTGGTTTTCTTCGAAGTCCACAAAAAAGGTGCCACTTTCCTCTGTGACATCAATAATTGATGGCTTGAAGAGACTCTATATCCAGAAGTTGAAGCCTTTAGAAGTTACTTACCGCTTTAATGATTTTGTCTCCCCATTATTGACAAATAGTGATTTTGATGCCAAACCTATGGTTATGCTTTTGGGTCAATATTCAACTGGTAAAACAACATTTATCAAACATCTGCTTAAATGTGGTTATCCAGGTGCACATATTGGACCTGAGCCTACAACTGATAGGTTTGTTGTTGTCATGTCTGGACCTGATGAGAGAAGCATTCCTGGAAATACTGTTGCTGTCCAAGCAGACATGCCGTTTAGTGGACTTACAACTTTTGGCACAGCTTTTCTGTCAAAATTTGAGTGTTCACAAATGCCTCATCCGCTACTGGAGCACATTACATTTGTGGACAGTCCTGGAGTTCTATCTGGAGAAAAGCAACGGACACAACGAGCATATGATTTTACGGGTGTAACATCTTGGTTTGCTGCAAAGTGTGATTTGATACTCCTCTTGTTTGATCCTCACAAACTTGATATTAGTGATGAGTTCAATCGCGTGATAACTTCTTTGCGGGGACATGATGACAAAATTCGAGTAGTTTTGAACAAGGCAGATCAAGTTGATACTCAGCAACTGATGAGGGTTTATGGAGCCTTAATGTGGTCACTCAGGAAGGTGCTGAACACACCTGAAGTCACTCGTGTGTATATTGGCTCCTTTAACGACAAGCCTGTAAATGATGCTGTCAGCGGTCCAATCGGAAAGGAACTGTTTGAAAAAGAACAGGAAGACCTTCTTTCAGATCTGAAAGATATACCAAAGGCGGCTTGTGATCGAAGAATCATTGAATTTGTTAAATGA 1329 0.4078 MELEFDPIPIGSCSKEHHNIYQQWFNFADSDSDGRMTGNDATKFFAMSNLSRQDLKQVWAIADSKRQGYLGFQEFIIAMQVVSLAQSGHPITHDLLNSDVDLKNLKPPIMEGLDVLLAKKKHKQKDTDVNGSPQLQLSPSSSWFSSKSTKKVPLSSVTSIIDGLKRLYIQKLKPLEVTYRFNDFVSPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLKCGYPGAHIGPEPTTDRFVVVMSGPDERSIPGNTVAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHITFVDSPGVLSGEKQRTQRAYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFNRVITSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLRKVLNTPEVTRVYIGSFNDKPVNDAVSGPIGKELFEKEQEDLLSDLKDIPKAACDRRIIEFVK* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0067 442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 403 IPR027417 -
Tpr4g0067 442 CDD EH 21 87 IPR000261 GO:0005515
Tpr4g0067 442 ProSiteProfiles EF-hand calcium-binding domain profile. 50 85 IPR002048 GO:0005509
Tpr4g0067 442 SUPERFAMILY EF-hand 14 100 IPR011992 -
Tpr4g0067 442 PANTHER EH DOMAIN 20 442 - -
Tpr4g0067 442 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 194 430 IPR030381 GO:0005525
Tpr4g0067 442 Gene3D - 136 201 - -
Tpr4g0067 442 Gene3D - 12 109 - -
Tpr4g0067 442 Pfam Dynamin family 200 359 IPR045063 -
Tpr4g0067 442 PANTHER EH DOMAIN-CONTAINING PROTEIN 1-LIKE 20 442 - -
Tpr4g0067 442 Gene3D - 202 440 IPR027417 -
Tpr4g0067 442 CDD EHD 199 442 - -
Tpr4g0067 442 ProSiteProfiles EH domain profile. 17 95 IPR000261 GO:0005515
Tpr4g0067 442 Pfam N-terminal EH-domain containing protein 163 195 IPR031692 -
Tpr4g0067 442 Pfam Cytoskeletal-regulatory complex EF hand 18 82 IPR000261 GO:0005515
Tpr4g0067 442 SMART eh_3 10 105 IPR000261 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0067 Tpr-Chr4 747185 755610 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0067 3 442 EF-hand Containing Proteins AT3G20290 82.579 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0067 K12483 - gmx:100804468 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0067 4 747185 755610 Tpr4g0067 4 747185 755610 ECH