Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0062 ATGAAGGCAAGTAAAGTTGATGAAAAGAATTTCATATGGTCTTTGACACTATGCCATGTCTTAATTTCTCTATTTGCAATCTCCCTTGCCTCTTGTGAATCTTTCAACTATGGCCAAGCCTTGTCACAAAGCCTCATCTACTTTGAGGCACAACGTTCAGGTCACCTACCCTACAATCAAAGGGTCAATTGGCGTCACCATTCTGGTCTAGCTGATGGTCTAGATGAAGAGGTGGACTTGGTGGGAGGATATTATGATGCAGGGGACAATGTGAAATTTGGACTACCAATGGCATTTACCATAACTCTCCTTTCTTGGGCTGCTATAGAGTACGGCGAACAAATTGCTGGCGCCGGAGAGTATGGCCACGCGATGGAGGCTATAAAGTGGGGGACCGACTATTTCATCAAGGCTCACACAAAACCAAATGTTCTATGGGCAGAGGTGGGTGATGGAGAGACTGATCATTATTGTTGGCAACGACCAGAGGATATGACAACACCACGAAGAGCTTATAAAGTTGATGAAAACAACCCTGGCTCCGATGTTGCTGGTGAGACGGCTGCAGCTTTGGCAGCCGCATCCATTTTGTTTAGGAAAATAGACCCACATTACTCTCGACTACTTTTGCATCATGCACAACAATTGTTTGAGTTTGGTGACAAGTTCAAGGGCAAGTATGATGAGAGTATTAGAGTGGCTAAAGGGTACTATACTTCAGTTAGTGGGTACAAAGATGAGTTGCTATGGGCTGCAATTTGGTTATATAAGGCCACACAAAAAGATGAATATTTAAACTATGTTTTGAAGAATGCTTATGATTTTGGTGGGACCACTTGGGCTATGACTGAATTCAGCTGGGATGTTAAGTATTCAGGTGTTCAAGCCATTGCTTCAATGCTTCTTTTGGAAGAAAAACACAAGAAACATGAAGTCATACTGAAACAATATCGTTCAAAAGCCGAGCATTATTTTTGTGCATGTCTTAACCTCAACAACGAGACTAAGGCTAACGTGGATAGGTCCCCAGGAGGATTACTATATGTCCGCCAATGGAACAATATGCAATACGTTGCAAATGCAGCATTTCTTCTCACTGTTTACTCTGATCACCTCTTAGCTGCAAATCAAACGTTGCATTGCCAAAAAGGCGAAGTGGCTCCCGGTGAACTCTTTGCCTTTGCAAAATCACAAGTTGATTACATCTTAGGTTCTAATCCAATGGGTATGAGCTATTTGGTTGGCTATGGTCCCAAATTCCCACAAAGGGTGCACCATAGAGGTGCATCCATTGAATCATATAAAAGGAACATGGGATTTATAGGGTGCACTCAAGGCTATGATAATTGGTATGAAAGTCCTAAGCCTAATCCAAACATACTTATTGGTGCTCTTGTTGGTGGACCTGATAACAATGACAAATTTAGTGATGAAAGAAGAAATTTTGAGCAGTTGGAGGCTTGTACCTACAATACTGCTGCACTTGTAGGGGTTTTTGCTAGATTGAACAACTTAGAGTAA 1521 0.4201 MKASKVDEKNFIWSLTLCHVLISLFAISLASCESFNYGQALSQSLIYFEAQRSGHLPYNQRVNWRHHSGLADGLDEEVDLVGGYYDAGDNVKFGLPMAFTITLLSWAAIEYGEQIAGAGEYGHAMEAIKWGTDYFIKAHTKPNVLWAEVGDGETDHYCWQRPEDMTTPRRAYKVDENNPGSDVAGETAAALAAASILFRKIDPHYSRLLLHHAQQLFEFGDKFKGKYDESIRVAKGYYTSVSGYKDELLWAAIWLYKATQKDEYLNYVLKNAYDFGGTTWAMTEFSWDVKYSGVQAIASMLLLEEKHKKHEVILKQYRSKAEHYFCACLNLNNETKANVDRSPGGLLYVRQWNNMQYVANAAFLLTVYSDHLLAANQTLHCQKGEVAPGELFAFAKSQVDYILGSNPMGMSYLVGYGPKFPQRVHHRGASIESYKRNMGFIGCTQGYDNWYESPKPNPNILIGALVGGPDNNDKFSDERRNFEQLEACTYNTAALVGVFARLNNLE* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0062 506 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 401 427 IPR018221 -
Tpr4g0062 506 PANTHER ENDOGLUCANASE 11 504 - -
Tpr4g0062 506 SUPERFAMILY Six-hairpin glycosidases 34 504 IPR008928 GO:0005975
Tpr4g0062 506 Pfam Glycosyl hydrolase family 9 37 498 IPR001701 GO:0004553|GO:0005975
Tpr4g0062 506 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Tpr4g0062 506 PANTHER ENDO-1,4-BETA-GLUCANASE 11 504 - -
Tpr4g0062 506 Gene3D - 33 505 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0062 Tpr-Chr4 626107 628815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0062 18 501 Glycoside Hydrolase AT2G32990 69.433 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0062 - - gmx:100786912 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0062 4 626107 628815 Tpr4g0062 4 626107 628815 ECH