Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4616 ATGTTTAACTTTAACCTTCTTCACCCTTTAACTACCAACATATCTTCCCTTAAAAAATTGAGATATCCAACATTTAACCTTGTTAATGAATACAACATTTTGTTCATAAAAGGCTTCATGATTTTATTCCTAAGTTGTATTACCATTAGACTTAACTTCTGTATTTCAAGTATCCCTTTTTCTTTAAAATCACTTCCTTTAGAAGGACACTTTAGTTTTGATGAACATGTCCTAAAAAATGCAGCTAGAGACTTTGGCAACAGGTACCAATCTTACCCTATGACAGTACTAAATCCAAAATCAGTTTCTGATATTGCAGTTACTATAAAGCATATATGGAATTTAGGTCCTAGTTCTGAGCTAGCTGTTGCAGCTAGAGGACATGGTCATTCACTTCAAGGTCAAGCACAAGCTCATGGAGGAGTTGTGATTAATATGGAATCACTTAATGTTGATGAAATTAAGGTGTATGGTGGAGAATTTCCTTATGTGGATGTGTCAGGAGGTGAATTGTGGATAAATATTTTGAATGAGACATTGAGGTATGGTTTAGCACCAAGATCTTGGACAGATTATTTGCATCTGACAGTTGGTGGTACTTTATCCAATGCTGGTGTTAGTGGTCAGGCTTTTAGGCATGGTCCACAGATAAGTAATGTTCAGAAGATGGAGATTGTTACAGGAACTGGGGAGGTGGTAAATTGTTCTGAAGACCAAAATGGTGAACTCTTTCACAGTGTACTTGGAGGATTAGGACAGTTTGGCATCATAACAAAAGCTAGAATCTTGCTAGAGCCAGCACCTACCATGGTTAAATGGATTAGAGTACTATATACAGATTTCACTACATTCACAAGAGACCAAGAGAAATTAATCTTTGCAGAAAAAGCTTTTGATTACATTGAAGGATTTGTGATTAAAAACAGAACTGGTTTGTTAAATAACTGGAGATTATCCTTCAGTCCACAAGATCCAGTTCAAGCTAGCAAGTTCAAGTCAGATGGAAGAACACTTTTCTGCCTTGAATTGGCCAAATACTTCAGTCTAGAAGATACCTTTGAAGTAAGTCAGGAAGTTGAGAAACACTTGTCCCACTTGAACTATATCTCATCAACACTTTTTCAAACAGAAGTCACATATGTTGATTTTCTAGACAGAGTACATATCTCAGAAGTTAAATTGCGTTCAAAAGGTTTATGGGATGTTCCACATCCATGGCTCAATCTTTTCATACCAAAAAGCAAAATACACAATTTTGCAGAGGTAGTCTTTGGCAATATTGTCAAGGGAACTAGCAATGGCCCTGTCCTTATCTACCCAGTAAATAAATCTAAGTGGGACAAGAGAACATCAGTTGTCACCCCAGATGAAGATATTTTCTATTTAGTGGCATTTCTTGCTTCTGCAGTGCCCTCATCCAATGGACCTGATGGACTTGAATACATATTAAATCAGAACAAAAGAATTTTAGAATATTGTGAAAGAGCCCATCTTGGAGTAAAGCAATATTTACCCCACTACACTACACAAGAAGAATGGCAGACACATTATGGTCCTAAATGGGAGATTTTCAAGCAAAGAAAATCTATTTATGATCCATTGGCAATACTTGCTCCTGGCCAAGGAATATTTTCTAAATCAATAACTTTCTCATGA 1656 0.3635 MFNFNLLHPLTTNISSLKKLRYPTFNLVNEYNILFIKGFMILFLSCITIRLNFCISSIPFSLKSLPLEGHFSFDEHVLKNAARDFGNRYQSYPMTVLNPKSVSDIAVTIKHIWNLGPSSELAVAARGHGHSLQGQAQAHGGVVINMESLNVDEIKVYGGEFPYVDVSGGELWINILNETLRYGLAPRSWTDYLHLTVGGTLSNAGVSGQAFRHGPQISNVQKMEIVTGTGEVVNCSEDQNGELFHSVLGGLGQFGIITKARILLEPAPTMVKWIRVLYTDFTTFTRDQEKLIFAEKAFDYIEGFVIKNRTGLLNNWRLSFSPQDPVQASKFKSDGRTLFCLELAKYFSLEDTFEVSQEVEKHLSHLNYISSTLFQTEVTYVDFLDRVHISEVKLRSKGLWDVPHPWLNLFIPKSKIHNFAEVVFGNIVKGTSNGPVLIYPVNKSKWDKRTSVVTPDEDIFYLVAFLASAVPSSNGPDGLEYILNQNKRILEYCERAHLGVKQYLPHYTTQEEWQTHYGPKWEIFKQRKSIYDPLAILAPGQGIFSKSITFS* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4616 551 Gene3D - 270 503 IPR016170 -
Tpr3g4616 551 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 22 548 - -
Tpr3g4616 551 Pfam FAD binding domain 96 236 IPR006094 GO:0050660
Tpr3g4616 551 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 93 128 IPR006093 GO:0016491
Tpr3g4616 551 Gene3D - 146 269 IPR016169 -
Tpr3g4616 551 PANTHER GULONOLACTONE OXIDASE 22 548 - -
Tpr3g4616 551 SUPERFAMILY FAD-linked oxidases, C-terminal domain 268 544 IPR016164 GO:0003824|GO:0050660
Tpr3g4616 551 Gene3D - 79 544 IPR016167 -
Tpr3g4616 551 ProSiteProfiles PCMH-type FAD-binding domain profile. 89 267 IPR016166 GO:0071949
Tpr3g4616 551 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 268 544 IPR015345 GO:0009690|GO:0019139|GO:0050660
Tpr3g4616 551 SUPERFAMILY FAD-binding/transporter-associated domain-like 67 266 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4616 Tpr-Chr3 51221434 51225476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4616 K00279 - gmx:100797430 956.051