Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4570 ATGGATTTGGCATCGAATCTCGGTGGAAAGATTCAAAAGGCTGAAGTTCTCTCCGCCGTCGATAAGTATGAGAAGTATCATGTATGCTATGGAGGTCAAGAAGAAGATAGGAAAGCTAACTATAGTGATATGGTTAATAAATACTATGATCTTGTGACAAGCTTTTATGAGTTTGGCTGGGGAGAATCGTTCCATTTTGCACCAAGATGGATAGGGGAATCTCTTAAAGAGAGCATCAAGCGACATGAGCACTTCCTTGCATTACAACTCGGCCTTAAGGCGGGACAGAAGGTTTTGGATGTTGGGTGTGGTATTGGGGGACCATTAAGAGAAATTTCTCGATTCAGCTCGACATCTGTTACAGGGTTGAATAACAATGAGTACCAGATCACAAGAGGAAAGGAACTCAATCGCATAAGTGGAGTGGACAAGACTTGCAACTTCATCAAGGCTGATTTCATGAAGATGCCATTCGAAGACAACAGTTTTGATGCAGTGTATGCTATTGAAGCCACCTGCCATGCACCAGATGCTTATGGGTGCTACAAAGAGATTTATAGAGTGTTAAAGCCTGGCCAGTGTTTTGCTGCTTATGAATGGTGCATGACTGATTCTTTTGATCCCAATAACCCAGAACACCAAAAAATCAAGGCAGAAATTGAGATCGGTGATGGACTTCCTGACATTAGATTGACCACAAAGTGTCTTGAAGCTCTAAAGCAAGCCGGTTTTGAGGTCATATGGGAGAAAGATCTAGCATTGGACTCTCCTCTTCCTTGGTACTTGCCTTTAGATACGAGTCACTTCTCACTTAGTAGCTTCCGTCTCACAACTGTTGGCCGACTTTTCACCAAAAATATGGTTAAAGCTCTTGAGTTTGTTGGACTGGCTCCAAAGGGGAGTCTAAGGGTTCAAGATTTCCTAGAGAAGGCTGCAGAGGGTCTAGTTGAAGGTGGAAAGAGAGAGATTTTCACACCAATGTACTTCTTTTTGGCGCGGAAGCCTGTTACAGACAGCAACTAA 1023 0.4311 MDLASNLGGKIQKAEVLSAVDKYEKYHVCYGGQEEDRKANYSDMVNKYYDLVTSFYEFGWGESFHFAPRWIGESLKESIKRHEHFLALQLGLKAGQKVLDVGCGIGGPLREISRFSSTSVTGLNNNEYQITRGKELNRISGVDKTCNFIKADFMKMPFEDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCMTDSFDPNNPEHQKIKAEIEIGDGLPDIRLTTKCLEALKQAGFEVIWEKDLALDSPLPWYLPLDTSHFSLSSFRLTTVGRLFTKNMVKALEFVGLAPKGSLRVQDFLEKAAEGLVEGGKREIFTPMYFFLARKPVTDSN* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4570 340 PANTHER CYCLOARTENOL-C-24-METHYLTRANSFERASE 1 337 - -
Tpr3g4570 340 Pfam Sterol methyltransferase C-terminal 272 335 IPR013705 GO:0006694|GO:0008168
Tpr3g4570 340 CDD AdoMet_MTases 97 192 - -
Tpr3g4570 340 Gene3D Vaccinia Virus protein VP39 19 269 IPR029063 -
Tpr3g4570 340 Pfam Methyltransferase domain 99 193 IPR013216 GO:0008168
Tpr3g4570 340 PANTHER ZGC:194242 1 337 - -
Tpr3g4570 340 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 39 335 IPR029063 -
Tpr3g4570 340 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 48 335 IPR030384 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4570 Tpr-Chr3 50801518 50808270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4570 90 251 Acyl Lipid Metabolism Gene Families AT1G73600 30.247 9.38e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4570 K00559 - gmx:548073 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4570 3 50801518 50808270 Tpr3g4570 3 50801518 50808270 ECH