Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4470 ATGGAAGGGTTAGTGAGTTATGGTATCAACCCAGTTCGTGTTATTGCCACTACAAAACAAGTATCTCGTTTTCTCTGTGATTCACAACCAAATCTGAAAATGGGTGTTCTTGGATTTCAAATTGGGATGCTGAATAACAAGAAAAAGTTTTCACCTTTGATCATGTCTGCTGCTGTTGGAAACTCCTCTCAACTTGGTCATTTCGAGAACACTCTTCCTTCCAAAGAAATTCTGGAGCTATGGAAGAATGGTGATGCAGTGTGCTTTGATGTCGATAGCACTGTGTGTCTGGATGAAGGAATTGACGAGCTTGCTGAATTTTGTGGGGCTGGAAAAGCTGTTGCAGAATGGACAGCAAGAGCAATGGGTGGTTCCGTTCCTTTTGAGGAAGCCTTGGCTGCCAGGTTATCTTTGTTCAATCCCTCTTTGTCTCAACTTCAGAATTTTCTTCAGCAACGGCCACCAAGGCTTTCTCCTGGCATTGAAGAATTGATCCAGAAACTAAAGGCTAATCACAAGCATGTTTATCTGATCTCCGGGGGCTTTCGTCAAATGATCAATCCTGTTGCTTCGATTCTCGGGATTCCACAAGAGAACATTTTTGCCAATCAACTGCTTTTTGGAAGCTCCGGACAGTTTCTTGGATTTGATGAAAATGAGCATACTTCAAGGAGTGGAGGAAAAGCCACTGCAGTCCAACAAATCAAGAAGGATCACGGGTACAAAGCATTGACTATGATCGGTGATGGTGCAACTGATTTTGAGGCTCGTAGACCAGGTGGTGCTGACTTGTTCATTTGCTATGCTGGTGTTCAACTTCGAGAAGCTGTTGCTGCAAAAGCAGATTGGCTAGTTTTCAATTTTCAAGACCTTATAAATTCATTGGGGTAA 891 0.4287 MEGLVSYGINPVRVIATTKQVSRFLCDSQPNLKMGVLGFQIGMLNNKKKFSPLIMSAAVGNSSQLGHFENTLPSKEILELWKNGDAVCFDVDSTVCLDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFNPSLSQLQNFLQQRPPRLSPGIEELIQKLKANHKHVYLISGGFRQMINPVASILGIPQENIFANQLLFGSSGQFLGFDENEHTSRSGGKATAVQQIKKDHGYKALTMIGDGATDFEARRPGGADLFICYAGVQLREAVAAKADWLVFNFQDLINSLG* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4470 296 SUPERFAMILY HAD-like 76 295 IPR036412 -
Tpr3g4470 296 PANTHER BNAA06G12800D PROTEIN 40 295 - -
Tpr3g4470 296 Gene3D - 148 295 IPR023214 -
Tpr3g4470 296 PANTHER PHOSPHOSERINE PHOSPHATASE 40 295 - -
Tpr3g4470 296 Pfam haloacid dehalogenase-like hydrolase 87 256 - -
Tpr3g4470 296 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 86 257 - -
Tpr3g4470 296 CDD HAD_PSP_eu 85 288 - -
Tpr3g4470 296 Gene3D Phosphoserine phosphatase; domain 2 97 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4470 Tpr-Chr3 49794035 49799513 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4470 K01079 - gmx:100789869 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4470 3 49794035 49799513 Tpr3g4470 3 49794035 49799513 ECH