Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4428 ATGGGGCAAGAAAACAACTTAGCACAAAAGAGAACAACAAGCACAGGAGGATTACCAACAACAACAATAACATCATCATCAAGAAACCGAACACTGCCACGTGGACGTCAGATCCAGAAAACATTCAACAACATAAAGATCACAATTCTCTGCGGTTTCGTAACTATTCTCGTCCTACGTGGCACTATCGGTGTCAATCTCGGTTCATCTCAAAACGACGCCGTTAATCAGAACGTAATCGAAGAAACTAACCGTATTCTCGCTGAGATCCGATCCGATTCCGATCCCAGTGATCGGAATCAAACCGAAACGTTTCTTAGTTTGAATGAAACTTATGCGCTTGGTCCTAAGATCCGTAATTGGGATACGGAGAGAAAAAAATGGTTAACTGATAATCCTGAATATCCTAATTTTGTTAGGGGAAAACCTAGAATTTTGCTTCTTACTGGTTCTCCTCCTAAACCGTGTGATAATCCTATTGGTGATCATTATCTTTTGAAATCTATCAAGAATAAGATTGATTATTGCAGATTGCATGGAATTGAAATTGTGTACAACATGGCTCACTTGGACATGGAGCTTGCAGGTTACTGGGCCAAACTGCCCATGATTCGGAGGCTCATGTTATCACACCCTGAGGTGGAATGGATTTGGTGGATGGACAGTGACGCATTCTTCACTGACATGGTGTTTGAGCTTCCCATGAGTAAATATAATGATTATAATCTGGTTCTTCATGGGTATCCTGATTTGTTGTTCGAGCAGAATTCTTGGATTGCAGTGAACACAGGGAGCTTTTTGTTTCACAATTGCCAGTGGTCCTTGGATTTACTCGATGCTTGGGCCCCTATGGGACCCAAAGGCCCGATTCGGGAGGAGGCTGGGAAGATTTTGACAGCAAATCTCAAAGGAAGGCCGGCGTTCGAGGCTGATGATCAGTCGGCGTTGATATATCTATTGTTGTCTAAGAAGGACAAATGGATGGAAAAGGTGTTTCTTGAGAATTCTTTTTATTTGCACGGTTATTGGGCTGGGTTGGTTGATCGGTACGAAGAGATGATGGAGAAGTATCATCCAGGATTAGGGGATGAGAGGTGGCCTTTTGTGACACATTTTGTGGGGTGTAAGCCTTGTGGGAGTTATGGAGATTATCCAGTGGAAAGATGCCTTAGTAGCATGGAGAGGGCTTTCAATTTTGCAGATAATCAAGTGCTTAAGCTCTACGGCTTTAGGCACCGTGGATTGTTAAGCCCTAAAATCAAGCGGATCAGGAATGAGACGGTAACTCCTTTGGAGTTTGTAGACCAGTTTGATATACGAAGGCAACATACAAGCAGCGTGGAATCAAGAAATTAG 1356 0.4299 MGQENNLAQKRTTSTGGLPTTTITSSSRNRTLPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGSSQNDAVNQNVIEETNRILAEIRSDSDPSDRNQTETFLSLNETYALGPKIRNWDTERKKWLTDNPEYPNFVRGKPRILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNMAHLDMELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPMSKYNDYNLVLHGYPDLLFEQNSWIAVNTGSFLFHNCQWSLDLLDAWAPMGPKGPIREEAGKILTANLKGRPAFEADDQSALIYLLLSKKDKWMEKVFLENSFYLHGYWAGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDIRRQHTSSVESRN* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4428 451 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 141 288 IPR029044 -
Tpr3g4428 451 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 10 444 IPR008630 GO:0016021|GO:0016757
Tpr3g4428 451 MobiDBLite consensus disorder prediction 1 33 - -
Tpr3g4428 451 Pfam galactosyl transferase GMA12/MNN10 family 142 380 IPR008630 GO:0016021|GO:0016757
Tpr3g4428 451 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 10 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4428 Tpr-Chr3 49293401 49296704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4428 1 451 Glycosyltransferase AT5G07720 77.681 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4428 K08238 - gmx:100819400 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4428 3 49293401 49296704 Tpr3g4428 3 49293401 49296704 ECH