Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4403 ATGAAGTTTGATCTTGTAATTGTTATTAATGCAATTATAATTTTTGGAATTGGTTTTGAAGGATGTAATTGCAAGATGGTGCAATTCATTTTTGGTGATTCTTTATCTGATGTTGGAAATAATAAGTACTTATCAAAAAGTCTTGCTACGGCTAGTTTGCCTTGGTATGGTATTGATTTAGGAAATGGTCTTCCAAATGGGAGGTTCTCTAATGGTCGTACAGTTGCTGATATAATAGGTGACAACATGGGGCTTCCTAGACCTCCAGCATTTCTAGATCCATCATTAACTGAAGATGTTATATTGGAAAATGGAGTGAACTATGCTTCAGGAGGTGGTGGCATATTGAATGAAACTGGCAGTTATTTTATTCAAAGGTTTTCTCTCTACAAACAAATTGAGCTATTTCAAGGGACACAAGAACTAATTAGAACTAAAATTGGAAAAGAGGAGGCAGATAAGTTTTTTCAGGAAGCACGTTATGTTGTTGCTTTAGGTAGCAATGACTTTATCAACAATTACTTGATGCCTCTTTATAGTGATTCATGGAGTTACAATGATGAAACCTTCATGGATTACTTAGTAGGAACACTGCAAGAACAACTTAAGGCACTGCATGGCCTTGGAGCAAGGGAATTGATGGTTTTTGGGCTGGGCCCAATGGGCTGCATTCCCCTTCAAAGAGTGCTTAGTACATCCGGAGATTGTCAACAAAAAACAAACAAGTTAGCTCTTAGTTTTAACAAAGCTTCAAGCAAGGTAGTGAATGATTTGGGGAAGCAACTTCCTAATGCAAGCTATAGATTTGGAGATGCATATGATGTGGTTAATGATGTGATTAGCAACCCAAGCAAGTATGGATTTCAAAATGCAGACTCACCATGTTGCTCCTTTGGAAGGATTAGACCTGCTCTTACATGTATACCAGCATCAACATTGTGCAAAGATAGAAGCAAATATGTATTTTGGGATGAATATCATCCATCAGACAAAGCTAATGAGTTAATTGCAACTGAACTTATCAAGAAGTTTGGATTTAAGCGTGTTGATCAAACACAATCTCCTACACCATCACCTGAAGTTGCTCCATCTCCTACTTCAGATGATTAA 1110 0.3721 MKFDLVIVINAIIIFGIGFEGCNCKMVQFIFGDSLSDVGNNKYLSKSLATASLPWYGIDLGNGLPNGRFSNGRTVADIIGDNMGLPRPPAFLDPSLTEDVILENGVNYASGGGGILNETGSYFIQRFSLYKQIELFQGTQELIRTKIGKEEADKFFQEARYVVALGSNDFINNYLMPLYSDSWSYNDETFMDYLVGTLQEQLKALHGLGARELMVFGLGPMGCIPLQRVLSTSGDCQQKTNKLALSFNKASSKVVNDLGKQLPNASYRFGDAYDVVNDVISNPSKYGFQNADSPCCSFGRIRPALTCIPASTLCKDRSKYVFWDEYHPSDKANELIATELIKKFGFKRVDQTQSPTPSPEVAPSPTSDD* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4403 369 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 358 - -
Tpr3g4403 369 SUPERFAMILY SGNH hydrolase 159 343 - -
Tpr3g4403 369 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Tpr3g4403 369 Pfam GDSL-like Lipase/Acylhydrolase 29 338 IPR001087 GO:0016788
Tpr3g4403 369 MobiDBLite consensus disorder prediction 349 369 - -
Tpr3g4403 369 Gene3D SGNH hydrolase 27 345 IPR036514 -
Tpr3g4403 369 MobiDBLite consensus disorder prediction 348 369 - -
Tpr3g4403 369 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4403 Tpr-Chr3 48953791 48957624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g4403 29 337 Acyl Lipid Metabolism Gene Families AT4G10950 32.797 1.81e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4403 - - gmx:100803991 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4403 3 48953791 48957624 Tpr3g4403 3 48953791 48957624 ECH