Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4400 ATGTCAGAGAAGAGTATGGTTCCGTCTAGGTTTATGTTTTGTGTGATGGTTATTTCTATGTTCCTATTGGTCTTGTCTACCATTTTCCTACTTCAGTTTAGCAGCCATTCTTTGATACCTAGATCAGTTTTAGAGCTTATTATTGTTAATAACTCGTCGTTTTACTTTACGCCCGATTTCAAGAAAGAACAAATCATGCTTCCTACATACCCTTCTGATGATTTAAAAGTTCAAACATTAAAACCTAGAGATTCTGATTGGAAAGTTTCTAATTCAAGTCAGAAGAGAAGTTCTGTAGAACAGAAGAATAAGAAGATGAACAGGGTATGTGATCCAACTCGAGCTCTGTTGAAAGTATTCATGTATGACTTGCCACCGGAATTTCACTTCGGGTTATTGGGTTGGAAGGGAAGTGTAAATCAAACGTGGCCAGAGGTGGGTAACCCCAGCCGTATTCCACGCTATCCCGGTGGATTGAATTTGCAGCATAGTATTGAATACTGGCTCACACTTGATCTTCTATCATCAAACACTGGAAAAGCTGGTCAACCTTGTACTGCAATTAGAGTGCAGAATTCAAGTCAAGCAGATATAATTTTTGTGCCGTTTTTCTCGTCTTTGAGTTACAATCGGCATTCCAAGATTCAAGGGGAGGGACAAGTTAGCGTTAATAAAATGTTGCAAGACAGATTGGTACATTTCTTAAAGGGGCGGAAAGAATGGAAACGCTCGGGCGGGAAGAATCATCTAATTGTAGCCCATCATCCTAACAGCTTGGTGGATGCAAGAAGAGACCTGGCTTCTGCTATGCTCATACTTGCAGATTTCGGTAGGTATCCTGTTGAGTTAGCAAATATCAAGAAAGATATAATAGCTCCATATAGACATTTGGTGGGTACGATACCAAGTGCTGAATCACCTTCATACGACGAGCGTCCCACGCTGGTTTATTTCCAAGGGGCGATATACAGGAAAGATGGAGGAATTATTCGCCAAGAACTGTATTACCTCCTCAAAGATGAGAAAGACGTGCACTTTACATTTGGGAGCATAGGTGGAAACGGGGTTAATCAGGCAAGCCAGGGCATGTCCATGTCCAAATTTTGCCTTAATATTGCTGGAGATACCCCATCATCCAATCGACTTTTCGATGCTATAGTAAGCCACTGTGTTCCCGTGATCATCAGTGATGAAATTGAGCTACCATTTGAAGATGTTTTGGATTACTCAGAGTTTTCCTTATTCGTTCGCGGCACCGATGCCATAAAGAAAGGCTACTTACTTAAATTCCTTCGGTCAATCAAGCGCAAGGAATGGACCAAGATGTGGGAAAGATTGAAGGAGATTACACATCACTTTGAGTATCAATATCCATCCCAATCCGGGGATGCAGTGAACATGATTTGGCAGGAAGTTGCGCGTAAGAAATCTTCAATGCAGTTCAATTCACACAGGAAGAACAGATACAATAGATCTCAGCGTCTTGTCAAGACTAACTGA 1500 0.4133 MSEKSMVPSRFMFCVMVISMFLLVLSTIFLLQFSSHSLIPRSVLELIIVNNSSFYFTPDFKKEQIMLPTYPSDDLKVQTLKPRDSDWKVSNSSQKRSSVEQKNKKMNRVCDPTRALLKVFMYDLPPEFHFGLLGWKGSVNQTWPEVGNPSRIPRYPGGLNLQHSIEYWLTLDLLSSNTGKAGQPCTAIRVQNSSQADIIFVPFFSSLSYNRHSKIQGEGQVSVNKMLQDRLVHFLKGRKEWKRSGGKNHLIVAHHPNSLVDARRDLASAMLILADFGRYPVELANIKKDIIAPYRHLVGTIPSAESPSYDERPTLVYFQGAIYRKDGGIIRQELYYLLKDEKDVHFTFGSIGGNGVNQASQGMSMSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFSLFVRGTDAIKKGYLLKFLRSIKRKEWTKMWERLKEITHHFEYQYPSQSGDAVNMIWQEVARKKSSMQFNSHRKNRYNRSQRLVKTN* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4400 499 MobiDBLite consensus disorder prediction 83 104 - -
Tpr3g4400 499 PANTHER EXOSTOSIN FAMILY-LIKE PROTEIN 2 488 - -
Tpr3g4400 499 Pfam Exostosin family 116 427 IPR040911 -
Tpr3g4400 499 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 2 488 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4400 Tpr-Chr3 48932530 48936337 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4400 - - gmx:100795371 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4400 3 48932530 48936337 Tpr3g4400 3 48932530 48936337 ECH