Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4397 ATGGCGACGAAAGGGAACCCTGGTGATAATAGAAATAACAAAGGTCCGGTGTCTATTTTCATTGTAGTTGCTTTGTGTGGTTTCTTCTATATATTAGGTTTGTGGCAAAGGAGTGGTTTTGGTAAAGGAGATAGCATTGCGGTTGAGATTACTAAACATACAGATTGTAGTGTTCTTTCCGATCTAAATTATGAAACTCATCATGATGGGGATGCCGGAACGCCTGACGATTCTGATGGTCAAGTCAAGGAATTCAAGCCTTGCGATGATCGCTACATTGATTACACCCCCTGCCATGATCAAGCAAGGGCAATGACGTTTCCGCGAGATAATATGAATTATAGAGAAAGGCATTGTCCTCCTCAAGAAGAGAAATTGCATTGTCTCATAGCTGCACCTAGAGGTTATGCCACACCGTTTCCTTGGCCAAAGAGTCGCGACTATGTGCCATATGCAAACGCGCCTTACAAGAGCCTGACAGTTGAGAAGGCTGTGCAGAATTGGATTCAGTATGAAGGGAATGTTTTTAGGTTTCCTGGTGGAGGAACTCAGTTTCCTCAGGGTGCTGATGCGTACATTAACGAACTTGCATCTGTTATTCCATTGGATAATGGGATGGTTAGAACTGCATTGGATACTGGGTGTGGGGTTGCTAGTTGGGGTGCGTACCTGTTTAAGAAAAATGTTATTGCAATGTCAATTGCACCAAGGGACTCTCATGAAGCACAAGTTCAATTTGCTTTGGAAAGAGGTGTTCCTGCAATCATTGGTGTTCTTGGAACAATAATGCTGCCTTTTCCTTCTGGATCTTTTGACATGGCACATTGTTCTCGCTGCTTGATTCCATGGGGTGCAAATGGTGGATTGTACATGAAGGAAGTTGACCGAGTTCTTAGACCTGGTGGTTACTGGATACTTGCTGGTCCTCCGATCAACTGGAAGCACAACTACCATGCATGGCAACGTCCTGAGGATGAGCTTAAGGAGGAGCAAAGGCAGATTGAGGATACTGCTAAACTTCTTTGCTGGGAAAAGAAACATGAGAAAGGTGAAATTGCAATTTGGAGAAAAGCATTAAACAATGATGAATGCAATGAACAAGATACTCAACCCACAATATGTGAATCTGCAAATTCTGATGATGTCTGGTACAAGAAGATGGAAAATTGTATAACTCCTGCTAAACCTGGTACTACATGGAAGCCATTCCCAGAGAGACTCAATGTTGTTCCTTCAAGAATCACCAGTGGATCCGTTCGTGGTGTATCCACAGAGTTATTTGAGGAGGACAATCGATTATGGAAGAAACATGTGAATGCTTACAAGCGGGTCAACAAAATCATCGACTCAGGGAGGTATCGTAATGTGATGGACATGAATGCTGGTTTTGGAAGTTTTGCTGCTGCCCTGGATTCTCCCAAATTATGGGTTATGAATGTTGTTCCTACAATTGCTGAGAAAGCTACCCTTGGTGTTGTATTCGAGCGAGGATTGATTGGCATTTATCACGATTGGTGTGAAGCCTTCTCCACATATCCAAGAACTTATGACCTTATCCATGCAAATGGTCTTTTCAGCCTGTACAAGAATGAGTGTACTGCAGAAGATATTCTACTAGAGATGGACCGCATCTTACGGCCTGAAGGGGCGGTAATATTCCGAGATCAGGTAGGTGTGCTGAAGCAAGTGAAAAGACTAGCAAAAGCAATGAGATGGAATACCAAAATGGTGGATCATGAAGATGGTCCACTGATTTCAGAGAAGGTCTTGTATGCCGTCAAGCGGTATTGGGTTGCAGGTGACAACACAACGAGCACAGATTGA 1824 0.4337 MATKGNPGDNRNNKGPVSIFIVVALCGFFYILGLWQRSGFGKGDSIAVEITKHTDCSVLSDLNYETHHDGDAGTPDDSDGQVKEFKPCDDRYIDYTPCHDQARAMTFPRDNMNYRERHCPPQEEKLHCLIAAPRGYATPFPWPKSRDYVPYANAPYKSLTVEKAVQNWIQYEGNVFRFPGGGTQFPQGADAYINELASVIPLDNGMVRTALDTGCGVASWGAYLFKKNVIAMSIAPRDSHEAQVQFALERGVPAIIGVLGTIMLPFPSGSFDMAHCSRCLIPWGANGGLYMKEVDRVLRPGGYWILAGPPINWKHNYHAWQRPEDELKEEQRQIEDTAKLLCWEKKHEKGEIAIWRKALNNDECNEQDTQPTICESANSDDVWYKKMENCITPAKPGTTWKPFPERLNVVPSRITSGSVRGVSTELFEEDNRLWKKHVNAYKRVNKIIDSGRYRNVMDMNAGFGSFAAALDSPKLWVMNVVPTIAEKATLGVVFERGLIGIYHDWCEAFSTYPRTYDLIHANGLFSLYKNECTAEDILLEMDRILRPEGAVIFRDQVGVLKQVKRLAKAMRWNTKMVDHEDGPLISEKVLYAVKRYWVAGDNTTSTD* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4397 607 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 94 594 IPR004159 GO:0008168
Tpr3g4397 607 Gene3D Vaccinia Virus protein VP39 162 362 IPR029063 -
Tpr3g4397 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 334 IPR029063 -
Tpr3g4397 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 440 573 IPR029063 -
Tpr3g4397 607 CDD AdoMet_MTases 209 303 - -
Tpr3g4397 607 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 2 603 IPR004159 GO:0008168
Tpr3g4397 607 PANTHER METHYLTRANSFERASE PMT18-RELATED 2 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4397 Tpr-Chr3 48873674 48879377 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4397 - - gmx:100807547 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4397 3 48873674 48879377 Tpr3g4397 3 48873674 48879377 ECH