Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4396 ATGGCACCCGACAAGAGCAAGAAGTTGAAAGTTTCCGACAACAACGACGAAATCGATGGAGAACTTGTCCTCTCCATTGAAAAGTTGCAGGAAATTCAAGATGAGCTCGAAAAGATCAACGAGGAGGCGAGCGATAAAGTTCTTGAAATCGAGCAAAAGTACAATGAGATAAGGAAACCTGTGTATGATAAGCGCACTGATCTTATCAAGTCTATCCCTGATTTTTGGCTAACTGCGTTTCTGAGCCATCCTGCTCTTGGTGAACTTTTGAGCGAAGAAGATCAAAAGATATTTAAGCATTTAAGCTCTCTTGAGGTTGAAGACCATAAGGATGTCAAATCAGGCTATTCAATCACCTTTAACTTCAATCCCAATCCTTATTTTGAGGAAACAAAGCTTGTGAAGACTTTTACCTTCAATGAAGAAGGAACAACAAAGATTACTGCTACTCCCATAAACTGGAAAGAGGGCAAGGAAGTTCCCAATGGAGGTAGTCAAGAGAAGAAAGGGAACAAGCGGCCTGCTTCTGATATCAGTTTCTTTAGCTGGTTTAGTGACACTGAGCAGAAAGATGATTTGGAGGACATTCATGATGAGACTGCAGAAATGATCAAGGATGATTTATGGCCAAATCCGCTTAATTATTTCAACAATGATGATCCTGACGACGAGGAAGATGAGGATGAGGATGAAGCTGGTGATGTGGGAAAGGATGATGATGAGGATGATGATGAGGACTCGGATGATGACGATGATGATGACGAATAG 768 0.4141 MAPDKSKKLKVSDNNDEIDGELVLSIEKLQEIQDELEKINEEASDKVLEIEQKYNEIRKPVYDKRTDLIKSIPDFWLTAFLSHPALGELLSEEDQKIFKHLSSLEVEDHKDVKSGYSITFNFNPNPYFEETKLVKTFTFNEEGTTKITATPINWKEGKEVPNGGSQEKKGNKRPASDISFFSWFSDTEQKDDLEDIHDETAEMIKDDLWPNPLNYFNNDDPDDEEDEDEDEAGDVGKDDDEDDDEDSDDDDDDDE* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4396 255 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 4 248 - -
Tpr3g4396 255 SUPERFAMILY NAP-like 12 217 IPR037231 -
Tpr3g4396 255 MobiDBLite consensus disorder prediction 148 174 - -
Tpr3g4396 255 MobiDBLite consensus disorder prediction 192 255 - -
Tpr3g4396 255 Gene3D - 2 72 - -
Tpr3g4396 255 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 4 248 IPR002164 GO:0005634|GO:0006334
Tpr3g4396 255 MobiDBLite consensus disorder prediction 218 255 - -
Tpr3g4396 255 Coils Coil 22 56 - -
Tpr3g4396 255 Pfam Nucleosome assembly protein (NAP) 70 218 IPR002164 GO:0005634|GO:0006334
Tpr3g4396 255 Gene3D Nucleosome assembly protein 73 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4396 Tpr-Chr3 48866320 48870458 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4396 K11290 - gmx:100808081 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4396 3 48866320 48870458 Tpr3g4396 3 48866320 48870458 ECH