Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3823 ATGGCTGCTCCAAATCAATCATCATCACCAACTCCTTTCGATATGCACTCTTTCTTCAATCCCCCAAACCCTAACCCTAACCCTAACCTTTCTTCTCCATTCCCTCCTTCTGCTCCTTCTCCACCACCCTCTTCTTCCTCTTCTTACCCTCCTCCCACCGGTCCTTTCCCTCCTCAACCTTTCCCAATCCATCAAAACAATAACTACCCTTACGATCACCACCAAAACCATTTCCCAATTCACCACCGTTCAATTTCATTCCCTACTCCACCTCTTCAACCTCAACCTATTCCTCCACCTTCAAATTCCAACGCCGGTGCTAGTCTCATGGCTCTTATCAGCCCCCGTCCTCCTACACAACAACAACAACCACAACAACAACCGCAACCTGTCTCTGTTAATTCTCCTTTGCCGCTCGCTACTCCATCCGCTGCTTCCATTACAGCGGCTAATGCTGCTGCGGCTGCTTTGACTCGGTTGCCGAGTAGTAAGGTTCCTAAGGGAAGGTATTTGATTGGTGACCATGTTGTGTATGATGTCGATGTTAGGTTGCCTGGTGAAGTACAGCCTCAACTTGAAGTTGCTCCGATTACGAAATATGGGTCGGACCCTAATCCGGTTTTGGGTAGACAGATTGCTGTGAATAAGTCTTATATATGTTATGGATTGAAACAGGGGAATATCAGAGTGCTTAATATTCATACTGCAGTTAGGTCTTTGCTTAGAGGACACACTCAGAGGGTCACAGACTTGGCATTCTTTGCTGAAGATGTTCATTTGCTGGCTAGTGTTGGCACAGATGGCCGTGTCTTTGTGTGGAAAATTGCTGAAGGTCCTGATGATGAAGATAAGCCTCAAATTACTGCTAATATTGTTATTGCTATTCAAATAGTAGGAGAGGAGAAAGTTGAACATCCCCAAATATGCTGGCACTGCCACAAACAAGAGATTTTGATAGTTGGTATGGGAAGACATGTTCTGAGAATTGACACCACAAAAGTTGGAAATGGTGAAGCCTTCGTGGCAGAAGATCCTCCAAAATGTCCCCTTAACAAGCTCATTGATGGGGTTCAGATTGTAGGAACACATGATGGTGAGGTCACTGATTTGTCAATGTGCCAATGGATGACAAATCGATTGGTATCTGCATCACAGGATGGCACGATAAAAATATGGGAGGATCGGAAGACAAAACCACTTGCTATTTTGAGACCACATGATGGGCATCCTGTTTTTTCTGCTACTTTTTTTACTGCTCCCCACCAGCCTGGTCATATTGTTCTTATCACAGCGGGACCACAAAACCGGGAAGTGAAGGTCTGGGTCTCAACAAGTGAAGAAGGTTGGCTGCTCCCAAGTGATACCGAATCCTGGAAATGCACTCAGACATTGGAGTTGAATAGTTCAGCTAAGCCGACTCAAAAGGATGCATTCTTTAATCAAGTTGCAGCATTGCCTCATGCAGGTCTGCTCTTACTTGCAAATGCCCAGAGGAATGCTATATATGCTGTGCACTTAGAATATGGTCCTAATCCGGAATCAACTCGCATGGATTATTTAGCCGAGTTTACTGTGACAATGCCCATTCTTAGTTTTACTGGAACAAGTGATATATTGCCTCATGGCGAACATATTGTTCAGGTTTATTGTGTTCAGACACTGGCTATTCAGCAGTATGCTTTGGATTTAGCACAATGCTTGCCTCCACCATCGGAAAATGTGGGACTAGTTAAGTCAGATTCCAGTGTTTCCCGAGATGTAATTACTGCTGAAGGATTCGCCTCTTTAGAATCGTCCGCAGGTAGAACATCTGAGATATCTTTACCCAGTTCTGCTCCCAAGACAATGATGCAAGCAAGTAGCACTGATAGTGGTCTTGTGGCAAGATACCCTTTAAGCTCGGGTCATATTGAGGCACCTATTTCTAGAGAAATCAGCAGTTCAAATATTGAAGCTAAAACTGTTACATTGGCTCCTTCTAGTAGTGATGCTGATATTGTTTGTGTTCCTTCTCCACCTCTGCCTTTGAGCCCAAGGTTGTCCAGGAAGCTTTCTGATTTCAGGAGTCCACAATCTAACTTGAGTGATCATGTTGGGGACCAAGCTGTTAATGATTATTCAGTTGAAAGACAAATGGGTACCATTCACAGGAACTTGTCCGGCCAATTGAGTAGTGATTCAAAGAATGATGAAAAGAAAATCAAACAGGACGACATTTCTACTGTACTTAACCCTTCTGTCATGTTTAAGCAACCAACTCATCTGGTTACACCATCTGAGATAACAAAAGCCAGTTCCTCCTCTGAGACTAATATGATTGATAGAATGAGTGAGGTAGAAACAAAGATCCAGGATGTGGTTGATGTGGGTAATGCCGAAGTAGAAGTGAAAGTGGTAGGTGAGGCAAGGCCTTATCAAAATGATGACTTTGGAAGGCAGGGGCCACAACAAAACCCTGTTTCTGACGGCAAAGAAAAATTCTTTTGCTCTCAGGCTTCTGATCTTGGCATTGAGATGGCCCGAGAATGTGGTGCAATAGGTGGGGAGACTTACATTACAGAGCAAACTGGACACGTTGATTCTACTGGAGGGGACTCGCTGGCCCAGCCTTCTAATGCAGGCGAGGATGGACTCCAAGACTTGCCAAAAGATGTACATGAAAAGGTTTCTGAGTCATCCACATCAATGGTAGTACCACCGTCACCTGCACCTAATGCAAAAGGGAAAAGACAAAAGGGTAAAAATTCTCAACCATCAGGTCCATCTTCCCCATCTCAAAGTGTGTGCAATTCAACTGATTCGTCCTATGAACCAAATGGAATTTCAAACCTTCCATCTACAGAAAATGGTTTGCCTCAAATTATGGCAATGCAAGACTCAATCAATCAGTTATTGACAATGCAAAAGGAGATGCAGAAACAAATGTCAATGGTGGTTGCAGTTCCAGTTACAAAAGAGGGTAGAAGGCTTGAGGCTGCCCTAGGGAAAAACATGGAAAAAGCTGTCAAGTCCAATGCTGATGCTCTCTGGGCTAGAATACAAGATGAGAATGCAAAAAATGAAAAGTTGTTGCGAGATCGTATCCAACAGGTTACAGGTTTGATTACTAACTTCATGAACAAGGATCTACCGTCACTATTGGAGAAAACTGTAAAGAAGGAAATGGGTTCAGTTGGGCAAGCTGTAATTCGTTCAATGTCTCCTGCTATTGAGAAAATAATATCCTCTACTATAGTGGAAACCTTCCAGAGAGGAGTGGGCGACAAGGCAGTGAATCAACTTGATAAGTCAGTTAATTCAAAACTCGAAGCTACCGTTGCTAGGCAAATCCAAGCACAGTTTCAGACAACTGCCAAACAGGCACTTCAGGATGCACTCAAGTCCAGTTTTGAAACAACAGTGGTTCCTGCATTTGAGATGTCCTGCAAAGCCATGTTTGAGCAAGTGGATACTACATTCCAGAAAGGCATGGCTGAACATTCAAATGCAGTGCAGCAACGCCTTGAATCGGGCCCTACTTCATTGGCAATGACACTAAGGGATTCCATTAATTCAGCATCATCAGTTACTCAAACCTTGAGTAGAGAATTGCTTGAGGGCCAGAGAAAGCTAATGGCACTTGCAACCTCAAGAACAAACTCAGGCACATTGAGTACTCTGCCCATCCAGCTGAACAACGGTCCTTTACTTCATGAAAAGGTTGAGGCACCACTAGATCCCACAAAGGAGCTCTCAAGGTTAATTTCTGAAAGGAAATATGAGGAGGCGTTTATTGCCGCACTGCATAGAAGTGATGTATCTATTGTATCGTGGTTATGTTCTCAGGTTGATTTACATGGACTCTTGTCAATGGTTCCTCTTCCCTTAAGCCAAGGTGTAGTGCTTTCACTTTTGCAGCAGTTGGCGTGTGATATCAACAACGACATGTCCCGAAAGATCTTGTGGATGACAGATGTGTCTACAGCCATAAATCCCTCAGATCCCATGATAACAATGCACGTCCGACCCATCTTTGAGCAAGTCTATCAGATACTGAATCATCAACGTAGCTTGCCTTCAATCACTGGACCCGATCTTTCAGCTATCCGTCTTTTATTGCATGTCATCAACTCTATGCTTACGACATGTAAATGA 4134 0.4378 MAAPNQSSSPTPFDMHSFFNPPNPNPNPNLSSPFPPSAPSPPPSSSSSYPPPTGPFPPQPFPIHQNNNYPYDHHQNHFPIHHRSISFPTPPLQPQPIPPPSNSNAGASLMALISPRPPTQQQQPQQQPQPVSVNSPLPLATPSAASITAANAAAAALTRLPSSKVPKGRYLIGDHVVYDVDVRLPGEVQPQLEVAPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVFVWKIAEGPDDEDKPQITANIVIAIQIVGEEKVEHPQICWHCHKQEILIVGMGRHVLRIDTTKVGNGEAFVAEDPPKCPLNKLIDGVQIVGTHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEDRKTKPLAILRPHDGHPVFSATFFTAPHQPGHIVLITAGPQNREVKVWVSTSEEGWLLPSDTESWKCTQTLELNSSAKPTQKDAFFNQVAALPHAGLLLLANAQRNAIYAVHLEYGPNPESTRMDYLAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTLAIQQYALDLAQCLPPPSENVGLVKSDSSVSRDVITAEGFASLESSAGRTSEISLPSSAPKTMMQASSTDSGLVARYPLSSGHIEAPISREISSSNIEAKTVTLAPSSSDADIVCVPSPPLPLSPRLSRKLSDFRSPQSNLSDHVGDQAVNDYSVERQMGTIHRNLSGQLSSDSKNDEKKIKQDDISTVLNPSVMFKQPTHLVTPSEITKASSSSETNMIDRMSEVETKIQDVVDVGNAEVEVKVVGEARPYQNDDFGRQGPQQNPVSDGKEKFFCSQASDLGIEMARECGAIGGETYITEQTGHVDSTGGDSLAQPSNAGEDGLQDLPKDVHEKVSESSTSMVVPPSPAPNAKGKRQKGKNSQPSGPSSPSQSVCNSTDSSYEPNGISNLPSTENGLPQIMAMQDSINQLLTMQKEMQKQMSMVVAVPVTKEGRRLEAALGKNMEKAVKSNADALWARIQDENAKNEKLLRDRIQQVTGLITNFMNKDLPSLLEKTVKKEMGSVGQAVIRSMSPAIEKIISSTIVETFQRGVGDKAVNQLDKSVNSKLEATVARQIQAQFQTTAKQALQDALKSSFETTVVPAFEMSCKAMFEQVDTTFQKGMAEHSNAVQQRLESGPTSLAMTLRDSINSASSVTQTLSRELLEGQRKLMALATSRTNSGTLSTLPIQLNNGPLLHEKVEAPLDPTKELSRLISERKYEEAFIAALHRSDVSIVSWLCSQVDLHGLLSMVPLPLSQGVVLSLLQQLACDINNDMSRKILWMTDVSTAINPSDPMITMHVRPIFEQVYQILNHQRSLPSITGPDLSAIRLLLHVINSMLTTCK* 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3823 1377 MobiDBLite consensus disorder prediction 876 936 - -
Tpr3g3823 1377 PANTHER ENHANCER OF MRNA-DECAPPING-LIKE PROTEIN 22 1377 - -
Tpr3g3823 1377 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 22 1377 IPR045152 GO:0031087
Tpr3g3823 1377 MobiDBLite consensus disorder prediction 1 57 - -
Tpr3g3823 1377 ProSiteProfiles Trp-Asp (WD) repeats profile. 241 275 IPR001680 GO:0005515
Tpr3g3823 1377 MobiDBLite consensus disorder prediction 1 16 - -
Tpr3g3823 1377 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 194 506 IPR032401 -
Tpr3g3823 1377 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 241 275 - -
Tpr3g3823 1377 Gene3D - 1289 1377 IPR044938 -
Tpr3g3823 1377 SMART WD40_4 396 442 IPR001680 GO:0005515
Tpr3g3823 1377 SMART WD40_4 356 393 IPR001680 GO:0005515
Tpr3g3823 1377 SMART WD40_4 234 274 IPR001680 GO:0005515
Tpr3g3823 1377 Gene3D - 197 541 IPR015943 GO:0005515
Tpr3g3823 1377 SUPERFAMILY WD40 repeat-like 207 506 IPR036322 GO:0005515
Tpr3g3823 1377 MobiDBLite consensus disorder prediction 17 57 - -
Tpr3g3823 1377 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 360 393 - -
Tpr3g3823 1377 MobiDBLite consensus disorder prediction 910 936 - -
Tpr3g3823 1377 ProSiteProfiles Trp-Asp (WD) repeats profile. 360 402 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3823 Tpr-Chr3 42689924 42698762 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3823 K12616 - gmx:100802374 2071.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3823 3 42689924 42698762 Tpr3g3823 3 42689924 42698762 ECH