Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3486 ATGAATTTCAACAACATGAAAGTTCCAAAGGTTCCTGGTGGTGGTGGAATCTCTGCTTTGCTTAAAGTTAGTATTATTGGTGGTCTTGCTGTATATGGAGCTACAAACACTTTGTACAATGTTGACGGTGGTCACCGTGCTATTGTCTTTAACCGTCTTGTTGGTGTCAAAGATAAGGTCTATCCTGAAGGAACACATATTATGATCCCGTGGTTTGAGAGGCCTGTGATCTATGATGTTCGTGCACGACCTCATTTAGTGGAGAGCACTTCAGGAAGCCGTGATCTCCAAATGGTGAAAATTGGACTTAGAGTTCTTACTCGTCCTGTGCCAGACCAATTACCAACAGTTTATCGTACTCTGGGTGAGAATTATAATGAAAGGGTCCTGCCTTCTATCATACACGAAACTCTCAAAGCTGTGGTTGCACAGTACAACGCCAGTCAGCTCATTACTCAGAGAGAGGCTGTTAGTCGAGAGATAAGGAAGATATTGACTGAAAGGGCTTCCCAATTCAACATTGCATTGGATGATGTGTCAATCACAAGTTTGACGTTTGGGAGGGAATTCACAGCTGCAATTGAAGCCAAGCAGGTTGCTGCTCAAGAAGCAGAGAGAGCGAAATTTGTTGTAGAAAAAGCTGAACAGGACAAAAGAAGTGCTGTTATTAGAGCAGTGGGAGAAGCCAAGAGTGCTCAATTGATTGGTCAAGCTATTGCCAACAACCCTGCTTTTATAACCTTGAGGAAAATTGAAGCTGCTAGGGAAATCGCTCAAACAATTTCAATTTCTGCCAACAAGGTTTACTTGAATTCAAATGATCTCCTGTTGAATCTTCAGGATTTAAATTTGGAGCCCAGTGGGAAGAATTAG 873 0.4227 MNFNNMKVPKVPGGGGISALLKVSIIGGLAVYGATNTLYNVDGGHRAIVFNRLVGVKDKVYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPTVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERASQFNIALDDVSITSLTFGREFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAVGEAKSAQLIGQAIANNPAFITLRKIEAAREIAQTISISANKVYLNSNDLLLNLQDLNLEPSGKN* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3486 290 Pfam SPFH domain / Band 7 family 40 215 IPR001107 -
Tpr3g3486 290 Gene3D Band 7 domain 66 200 IPR036013 -
Tpr3g3486 290 SUPERFAMILY Band 7/SPFH domain 69 205 IPR036013 -
Tpr3g3486 290 SMART PHB_4 37 198 IPR001107 -
Tpr3g3486 290 PRINTS Prohibitin signature 81 97 IPR000163 GO:0016020
Tpr3g3486 290 PRINTS Prohibitin signature 99 118 IPR000163 GO:0016020
Tpr3g3486 290 PRINTS Prohibitin signature 122 140 IPR000163 GO:0016020
Tpr3g3486 290 PRINTS Prohibitin signature 145 161 IPR000163 GO:0016020
Tpr3g3486 290 PRINTS Prohibitin signature 168 187 IPR000163 GO:0016020
Tpr3g3486 290 PRINTS Prohibitin signature 193 216 IPR000163 GO:0016020
Tpr3g3486 290 PRINTS Prohibitin signature 216 232 IPR000163 GO:0016020
Tpr3g3486 290 PANTHER PROHIBITIN-1, MITOCHONDRIAL-LIKE 1 287 - -
Tpr3g3486 290 Coils Coil 197 217 - -
Tpr3g3486 290 CDD SPFH_prohibitin 38 232 IPR000163 GO:0016020
Tpr3g3486 290 PANTHER PROHIBITIN 1 287 IPR000163 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3486 Tpr-Chr3 38535925 38541296 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3486 K17081 - gmx:100811958 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3486 3 38535925 38541296 Tpr3g3486 3 38535925 38541296 ECH