Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3455 ATGTGTGAAGGAATGAAGAAGGTAGTGGTGACCGGTGCATCCGGTTACCTTGGTGGAAGGCTCTGTCACGCCCTCCTCCGTCAAGGTTACTCCGTTAAGGCTCTCGTCAGACGCACCAGCGATCTTTCCCAACTTCCTCCCCTTTCCGAAATTATCTACGGCGACGTCACCGACTTTTCCTCTCTCCTCTCTGCTTTCTCCGACTGCTCCGTCGTCTTCCACCTCGCCGCTCTCGTTGAGCCTTGGCTCCCTGATCCCTCTAAATTCTTCTCCGTCAACGTTGAAGGTTTGAAGAATGTGTTAGAAGCAGTGAAACAAACTAAAACGGTGGAGAAACTCATATATACGTCGTCGTTTTTCGCTATAGGACCAACCGACGGAGCTATTGCCGATGAGAATCAATTTCATCATGAGAAATTTTTCTGCACGGAATATGAGAAATCAAAGGTTGCCACTGACAAAATTGCACTTCAAGCTGCATCTGAAGGGGTGCCAATAGTATTGCTTTATCCTGGGGTTATTTATGGACCTGGTAAAGTCACCGGAGGAAATGTTGTTGCAAAGATGCTGATAGAACGTTTCAGTGGACGATTACCTGGTTACATAGGCAATGGAAATGATAAATGTTCGTTCAGCCACGTTGATGATGTAGTGGAGGGGCACATTGCTGCTATGGAAAAGGGAAAAATTGGGGAGAGGTATTTACTGACGGGTGAAAATGCGTCGTTTAATCAAGTTTTTGATATGGCTGCTGTGATCACTAATACTAGAAAACCAATGGTTAGTATCCCTTTGTGGGTGATTGAATTGTATGGATGGTTGTCAGTATTATTCTCCCGAATCACTGGAAAGTTACCTCTCATCAGTCCACCGACGGTGGATGTTTTAAGACATCAGTGGGAGTATTCCTGCGAGAAAGCTAAAAGGGAGCTAGATTATAAGCCCAGAAGCTTGAGAGAAGGGCTTGCGGAGGTACTACTCTGGTTAAAGAACTTGGGATTAATAAGATATTAG 1014 0.4527 MCEGMKKVVVTGASGYLGGRLCHALLRQGYSVKALVRRTSDLSQLPPLSEIIYGDVTDFSSLLSAFSDCSVVFHLAALVEPWLPDPSKFFSVNVEGLKNVLEAVKQTKTVEKLIYTSSFFAIGPTDGAIADENQFHHEKFFCTEYEKSKVATDKIALQAASEGVPIVLLYPGVIYGPGKVTGGNVVAKMLIERFSGRLPGYIGNGNDKCSFSHVDDVVEGHIAAMEKGKIGERYLLTGENASFNQVFDMAAVITNTRKPMVSIPLWVIELYGWLSVLFSRITGKLPLISPPTVDVLRHQWEYSCEKAKRELDYKPRSLREGLAEVLLWLKNLGLIRY* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3455 337 Pfam NAD dependent epimerase/dehydratase family 8 234 IPR001509 -
Tpr3g3455 337 Gene3D - 2 336 - -
Tpr3g3455 337 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 7 337 - -
Tpr3g3455 337 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 337 - -
Tpr3g3455 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 333 IPR036291 -
Tpr3g3455 337 CDD AR_FR_like_1_SDR_e 8 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3455 Tpr-Chr3 38101267 38115454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3455 1 246 Miscellaneous Gene Families AT1G09510 30.224 3.38e-23 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3455 K15891 - gmx:100792747 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3455 3 38101267 38115454 Tpr3g3455 3 38101267 38115454 ECH