Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3449 ATGGAAAGAACACAATCATCACTTCTACAAATCCAAGCTCCTACCTATGGAAACTTGGTGACTATTCTAAGCATCGATGGTGGCGGTATTAGGGGCATTATTCCCGCTACCATCCTCGAGTTCCTTGAATCGCAACTTCAAGAATTGGATGGTGAATCAGCAAGACTTGCGGATTACTTTGATGTGATTACAGGAACAAGTACCGGTGGCCTTGTAACTGCCATGTTAACCGCTCCAAATGATAATAAACGTCCGCTTTTTGATGCCAAGGATATCAAGCCCTTTTACTTAGAACACTGTCCAAAGATTTTCCCACAACAAAAGCACACGTTCGGATCAGTGGGGAAATTGTTCAAATCATTGACAGGACCAAAATATGATGGAAAATATCTTCACAATGTTGTGAGGGAGAAGCTTGGGGATGTTCGCGTGCATGAGACACTCACCAATATCGTGATCCCCGCTTTTGACATAAAGACATTGCAACCAATCATTTTCTCATCTTATAAGATTAAGAAAAACCCTTGCTTTGATGCTCGACTCTCAGACATATGCATCAGTACCTCGGCTGCTCCTACTTATCTTCCTGGTTACAACTTCAAGAACCAAGACACCGAAGGGAACATACATGAATTCAACCTCATTGATGGCGGTGTTTCTGCAAATAATCCGACTTTAGTAGCCGTGAATGAAGTAACCACACAGATAATTAATGAGAATAATGACTTTTATGCCATCAAACCCATGGAATATAGTCGCTTTTTGATAATCTCGTTGGGCACGGGGACACAGAAGAATGAACAAAAGTTTGATTCGAAAATGGCCGCCAAATGGGGTCTATTGGATTGGTTAACCCATGGCGGATCCACTCCCTTAATCGATATCTTTAGCCAATCCTCTGGAGATATGGTTGACATTCATCTGGCTACGGTCACTGAAGCACTTAACTGCCAAGAAAATTACCTTCGAATACAGGATGATACATTGACTGGTATAGACTCTTCAGTTGATATTGCCACAAAAGAGAATTTAGATAAACTTTGTCAAATTGGAGAAAAGTTATTGAAGAAACCCGTAGCTAAGATCAATTTGGAGAATGGAATGTGTGAGCCTACTCAAAATGGGGAGACCAATCAAGAAGCTCTCAAAAGGTTCGCAAAAATACTTTCACAAGAGAGGAAGCTTCGAGAATTAACATCCCCTCACGTACACTAA 1215 0.4115 MERTQSSLLQIQAPTYGNLVTILSIDGGGIRGIIPATILEFLESQLQELDGESARLADYFDVITGTSTGGLVTAMLTAPNDNKRPLFDAKDIKPFYLEHCPKIFPQQKHTFGSVGKLFKSLTGPKYDGKYLHNVVREKLGDVRVHETLTNIVIPAFDIKTLQPIIFSSYKIKKNPCFDARLSDICISTSAAPTYLPGYNFKNQDTEGNIHEFNLIDGGVSANNPTLVAVNEVTTQIINENNDFYAIKPMEYSRFLIISLGTGTQKNEQKFDSKMAAKWGLLDWLTHGGSTPLIDIFSQSSGDMVDIHLATVTEALNCQENYLRIQDDTLTGIDSSVDIATKENLDKLCQIGEKLLKKPVAKINLENGMCEPTQNGETNQEALKRFAKILSQERKLRELTSPHVH* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3449 404 Pfam Patatin-like phospholipase 23 228 IPR002641 GO:0006629
Tpr3g3449 404 Gene3D Cytosolic phospholipase A2 catalytic domain 9 400 - -
Tpr3g3449 404 SUPERFAMILY FabD/lysophospholipase-like 18 380 IPR016035 -
Tpr3g3449 404 PANTHER PATATIN 1 403 - -
Tpr3g3449 404 CDD Pat17_isozyme_like 17 367 - -
Tpr3g3449 404 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 229 IPR002641 GO:0006629
Tpr3g3449 404 PANTHER XYLOSE ISOMERASE 1 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3449 Tpr-Chr3 38042493 38044621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3449 11 403 Miscellaneous Gene Families AT2G26560 64.377 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3449 - - gmx:100783909 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3449 3 38042493 38044621 Tpr3g3449 3 38042493 38044621 ECH