Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3438 ATGTATAAACATATGTCTAGAATTTTCATACAAGGATTTATCTTCCTTGTGATTGCTTCACTAGCAGCAGCAGGGTCAGAAAACAAGGCTAGAGCCAAAAGAAGCATCTTGGTTGGAGACTCTCAAGGTTGGCGTGCCGGTACTAACTACACTCAATGGGCCATCAAAAATAGTCCCTTCCGCATAAATGACACATTAGTGTTCAAGTATCCCCCAAAGGGAAATTCCACCGTTGTTCCTAGCGTTTACTTACTACCAAACATGTGGAGCTATATGACATGTGAATTTAGAGGAGCAAAGCTAATTGGAAGTGAATTTCAGGGTGGTGGTGAAGGCTTAAAGATTGAGCTGAATGAGTTGAAGCCTTACTACTTTGCCTCTGATGAAGGCAATGCCTATGATTGTATTGCTGGACTCACTAAGTTCATTGCAGTTCCATCTACACGTTCATTTTAA 456 0.4123 MYKHMSRIFIQGFIFLVIASLAAAGSENKARAKRSILVGDSQGWRAGTNYTQWAIKNSPFRINDTLVFKYPPKGNSTVVPSVYLLPNMWSYMTCEFRGAKLIGSEFQGGGEGLKIELNELKPYYFASDEGNAYDCIAGLTKFIAVPSTRSF* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3438 151 PANTHER GLYCINE-RICH PROTEIN-LIKE 10 150 - -
Tpr3g3438 151 Pfam Plastocyanin-like domain 44 130 IPR003245 GO:0009055
Tpr3g3438 151 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 10 150 - -
Tpr3g3438 151 Gene3D - 32 147 IPR008972 -
Tpr3g3438 151 ProSiteProfiles Phytocyanin domain profile. 34 148 IPR003245 GO:0009055
Tpr3g3438 151 SUPERFAMILY Cupredoxins 36 145 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3438 Tpr-Chr3 37931851 37932745 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3438 38 95 Miscellaneous Gene Families AT3G60270 41.379 6.84e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3438 - - vra:106760467 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3438 3 37931851 37932745 Tpr3g3438 3 37931851 37932745 ECH