Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3436 ATGAGGGCAGAGTCACACCATTCCCGAAGCTTAATCCACCAAATCTACGCTCCATTATCCAACGAATTTCCATTCGCAACACCTCTTCCTTCTCTCCGAACAAACGAACTCGAACTCGTACGAGGCGTTTTACGAATGCTACAAGGCTTTTCGTCTTCGTTATTCTCTTGGGATCACATTGAAAACCGTTTTCGTGTCAAAAATGGAGTTTATGTGACGCATTTGTCCCTGAATAGTCTTCATTCACTTCTCAATCAATTCATTCACGCTGCTACGTGTCTTCAATTGGTGGAAATTACGATCAAGAAGATCGAAATTGCAGTGCCGAGTCCTCCTCCTACTTTGAGAGCGTTTGTTACTTCTGCTTCTGAGTGGCTTAAGCGGTTACGGAATGTTGTGTTGAAGGAGGAAGTGTCTACTAGCAATGTAGATGGAATATCCACTCCTACTTTGTTAGGGTTCAAAAATTCTTTATCGAGTCTTTGCTCGGGTGCTGAGTTTCTATTGCGAATTGTTCATGAGGCCATCCCTGATGTATATTTTGAGTTTGGGCCATCTGTGCCTGCAGCAGACTTGGCTGTTCATGTTCTTGACTATCTTCATAAGAAGCTTGAAGAAATGTGTCTTGTACAAGGTGGCGAGGAGGAAGCTTATCTAATGGTACTTTACATGTATGTGGGAAGCTTGTTGCCATATATTGAGGGTCTTGATTCCTGGCTTTTTGATGGAATACTTGATGACCCTTCTGATGAGATGTTCTTTTTTGCTAATAAAGAAGTCTCAGTTGCTGAGGCTGAGTTCTGGGAAAAGAGTTATCTAATAAAAAAGCTACAACATGGTAAATTAGATACTGAGTTGTCTTCCACAGATTATGCCGGTATGCCAGCTTCAAATAAGAAGAAGGAAATGGGCATGAGGGATTCCATCTCTTTGTCTAGTACAATTCAAGGAAAAGAGCAGATCATTAGAGACTGTCCAGCTTGTCCTTTGTTTATTAAGGATTTAGCTAAGTCAATAGTTTCTGCAGGAAAATCTTTGCAGCTGATGCGCCATGTCCCAAATTCCTTAGCAGTACGTAGCAAAAGAAATAATTTTCAGTTTGAAAGAACTCAATCTTTAAACTATGGTTTGTCTCCTTCTCATAGGGTGGCTGGGCTAACGCTGTCAGAAATTTTTTCTGTATCACTAGCTGGACTTATTGGTCATGGTGACCATGTTTGTAAATACTTTTGGCAAGATGATTGGCACGAATCTGTGTCTGTTTCTCCCTTTGCATCTTATTTAAATTTAAACGCGGAAAAAACAGACAATGAAAACTTAACTGCTTCACCACACTCGGAGAAGATTTGGTACAAGTTCTTGATTGATACATTATTTCAAAAAGGATCAGCTGATTTGAAGCCAAAATATGAAAATAATGTCAATGGAGATTCTACAGGGGATAAAGTTCTTAACGAGGAATCGTTTCTCCTGAGATCATGCTTACAAAATCCAGTTATTACTGTTTCTCGAAAAACAATTGGAAACAATGGGGATGCCTTGAAAACATTGAATTTATCTCAAAAGTTCTGCTTGCCTTCTTTAAATGATGAGGGTTTAAGAAAGGCTATATTTGGTGCAGAAAGTACGTCATTTTCTGATAGTGAAGGAACAAACTATTTGTTTGGTTTTCAGTATGATGAATCCAAATACCTTCACTCACATGATACGAGGAATCTGATAGAAATGCTGTTTCCTTTTCCCACCATTTTGCCTTCGGTTCAGGATGGTCTTCCTGTGTCAGAGCTCTTGCCTTTCCAGAGAAACAGCACTCTTCCTTCAAAAGTTCTTCACTGGATGCAAAATGTTGACCTAAGAATGACTCCACTGCCTCTGATTATTATGCAGTACTGTCTAACCACCTATATTCAGAAACAGGTAGATTATATTGGAGTGAATATGTTGTTAAAGTTGATGAATGAATGGAGGTTGATGGATGAGCTTGCAGTGCTGCGAGCTATATACTTGTTAGGTTCAGGTGATTTGCTACAACACTTTTCAACTGTAATTTTCGATAAGTTGGATAAGGGTGAAACATTGGATGATGATTTTGAATTAAACACAATATTACAGGAATCAATCAGAAATTCTGCTGATTGTATGCTGTTAAGTGCTCCAGATGCATTGGTAGTGTCAATAACCAAAAATATTGTTGAGAAGGATGAGGAAGCTAGCACAAGTGGTTCTGTTTTGGGTACTTCTCGTAAAAGTCATGTCAATAACTCCGGGATTAACGGCCTTGATATGCTAAAATTCACATATAAGGTACCTTGGCCTCTTGAACTCATTGCAAACACAGAGGCAATTAAGAAGTACAACCAGGTTATGCGGTTTTTGCTGAAGGTCAAGCGTGCAAAATTCGTATTAGATAAAGTGCGGAGGTGGATGTGGAAGGGTAGGGGGTCTACAACAAATAACAGAAAACATCATTGGTTAGTGGAGCAGAAACTCCTACATTTTGTGGATGCTTTTCACCAATATGTGATGGACCGGGTATATCACAGTGCTTGGCGTGAACTATGTGAAGGTATGTCTGTGGCCAAATCTCTCGATGAGGTCATTGAAGCCCACGAGGCTTACATGTTATCGATACAGCGGCAGTGCTTTGTGGTTCCTGATAAACTGGGAGCTTTGATTGCCAGCCGTGTTAATATCATCCTTGGTTTAGCTTTAGACTTCTATAACATACAACAAACATTAAAAAGGGGCGGAGCTGTTTCTGCAAACAAGGCAAGGTGTGAGATGGAAGTCGACCGGATAGAGAAACAGTTTGATGATTGCATTGCTTTCTTACTCAGGGTCTTATCTTTCAAACTAAATGTAGGGCATTTCCCTCATTTGGTTGATCTGGTCACCAGAATTAACTACAACTATTTCTATATGTCTGCTAATGGAAATTTAATGACCACCTCTGGCCCTGGAAGTGTTACTTCACGATTGGGGAAAGCCTCTGGTAAAATTGGTTGA 3006 0.3992 MRAESHHSRSLIHQIYAPLSNEFPFATPLPSLRTNELELVRGVLRMLQGFSSSLFSWDHIENRFRVKNGVYVTHLSLNSLHSLLNQFIHAATCLQLVEITIKKIEIAVPSPPPTLRAFVTSASEWLKRLRNVVLKEEVSTSNVDGISTPTLLGFKNSLSSLCSGAEFLLRIVHEAIPDVYFEFGPSVPAADLAVHVLDYLHKKLEEMCLVQGGEEEAYLMVLYMYVGSLLPYIEGLDSWLFDGILDDPSDEMFFFANKEVSVAEAEFWEKSYLIKKLQHGKLDTELSSTDYAGMPASNKKKEMGMRDSISLSSTIQGKEQIIRDCPACPLFIKDLAKSIVSAGKSLQLMRHVPNSLAVRSKRNNFQFERTQSLNYGLSPSHRVAGLTLSEIFSVSLAGLIGHGDHVCKYFWQDDWHESVSVSPFASYLNLNAEKTDNENLTASPHSEKIWYKFLIDTLFQKGSADLKPKYENNVNGDSTGDKVLNEESFLLRSCLQNPVITVSRKTIGNNGDALKTLNLSQKFCLPSLNDEGLRKAIFGAESTSFSDSEGTNYLFGFQYDESKYLHSHDTRNLIEMLFPFPTILPSVQDGLPVSELLPFQRNSTLPSKVLHWMQNVDLRMTPLPLIIMQYCLTTYIQKQVDYIGVNMLLKLMNEWRLMDELAVLRAIYLLGSGDLLQHFSTVIFDKLDKGETLDDDFELNTILQESIRNSADCMLLSAPDALVVSITKNIVEKDEEASTSGSVLGTSRKSHVNNSGINGLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFLLKVKRAKFVLDKVRRWMWKGRGSTTNNRKHHWLVEQKLLHFVDAFHQYVMDRVYHSAWRELCEGMSVAKSLDEVIEAHEAYMLSIQRQCFVVPDKLGALIASRVNIILGLALDFYNIQQTLKRGGAVSANKARCEMEVDRIEKQFDDCIAFLLRVLSFKLNVGHFPHLVDLVTRINYNYFYMSANGNLMTTSGPGSVTSRLGKASGKIG* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3436 1001 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 4 994 - -
Tpr3g3436 1001 Pfam Gamma tubulin complex component N-terminal 40 394 IPR041470 -
Tpr3g3436 1001 Pfam Gamma tubulin complex component C-terminal 657 973 IPR040457 GO:0043015
Tpr3g3436 1001 Gene3D - 657 972 IPR042241 -
Tpr3g3436 1001 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 4 994 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3436 30 704 Glycosyltransferase AT1G20570 48.763 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3436 K16572 - gmx:100782299 1549.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3436 3 37903133 37911271 Tpr3g3436 3 37903133 37911271 ECH