Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3419 ATGAAGAATCGCAACGCCACAAAACCCCGAAATTACCCCTTATCGGAGCTTCAATCACATAACCCGGACCACGTCCTCGAGATTGTCCTAGAAACCGTACTCCAATTCCTCACTTCACGACGCGACCGAAACGCCGCCTCATTGGTCTGTAAATCATGGTGGCGAACGGATGCACTCACCAGATCGGAACTCTTCATATCCAACTGCTACGCAATCTCTCCCCGCCGCGTTGTATCCCGGTTCAGCCGCATCCTGTCTGTCACCATCAAAGGTAAGCCACGTTTGGCTGATTTCGATATGTTGCCGGCCGATTGGGGGGCTCATTTCTCTCAGTGGCTCACCGCCTTCTCCACCGCTTACCCATGGCTTGAGAAGGTTCACCTCAAACGCATGTCTGTCACCGACGACGATCTTTCTCTCCTCGGTGATTCATTTGCCGCATTCAAAGAACTCGTCCTCGTTAGTTGTGAAGGTTTCGGAACCCCTGGACTCGCCGCTGTTGCCACCAAGTGCAGGTTGCTGAGAGTGCTTGATCTTGAGGAATCTTTGGTTGATATTAATGTTAGCGACTATAGCGGAATAGTTGATTGGATATCATGTTTTCCAGAGGGTGAAACCCATTTGGAATCTCTTGTTTTTGATTCTGTTTTCTCACCGATTAATTTGGAGGCGTTGGAGAAGTTGGTTGCTAGGTCTCCTTCATTGAAGAGGCTGAGAGTGAATGGACACGTTAAAATATTTCATCTATACCGTTTGATGCATATAGCACCACATCTAACGGATCTTGGAACAGGTTCTTTTGATGTACCAGAAGATACCGAGGATGATGAACTGGTTTTTGAGTCTCCATTTGCGGCTTCCAAGTCCTTAGTTTGTTTATCTGGATTCAGGGATATTTTGCCCGAGTACCTACCTGACATTTATCCTGTTTGTGGTAATCTCACATTTTTGGATTTCCAGTATGCTGATATTATTGATACAGATCAAATCAAATCGGTTGTTTCTCGTTGTCATAAACTACAGACCCTTTGGGTCCGTGATGCAATATTTGATGAGGGCCTACAGGTAGTAGCTCAAACTTGCAAAGATTTGCGCGAGCTTCGTGTTTATCACCTTCACGCAAGTGATGGGGTAGAAGCTCCGGTTTCTGAGGTAGGATTGGAAGCGATTTCTCGAGGCTGTAGGAAATTGCAGTACATTATGTTTTTCTGTCAAAGAATGACAAATGCAGCTGTGGTAGCTTTGTCAAGGAATTGCCCTAATCTTGTAGTGTTTCGACTATGTATAATCGGGCGTTATATGCCAGATGCATTGACTCAACCACCCATGGATGAGGGTGTTGGTGCTATTGTTATGAACTGCAAGAAGCTCACTCGACTTGACGTGTCTGGTTTTTTGACTGATCGAGCTTTTTCTTACATTGGGAAGTATGGGAAGTTGATTAGGACACTGTCAGTTAATTTTGCTGGAGACACAGACTTGGGGCTCAAGAATGTGCTACAAGGATGTACTAATCTGCAAAAGCTTGAAATCAGGGATGGTCCATTTGGGGATGGAGCTCTGTGTTGTGGTTTGCAACATTTCTACAACATGAGGTTTCTCTGGATGTCTTCCTGTAAAGTGACTCGCCAAGCTTGCCAAGCAATTGCACAGACACTGCCCCATCTGGTGTTGGAAGTCATCAATACTGCACAAGACCCAGTTGATGACGTCGAGTTACTTTACATGTATCGGTCTCTTGACAAGCCAAGGGATGATGCTCCAAAACTGGTCACCGTCCTTCATTAG 1788 0.4569 MKNRNATKPRNYPLSELQSHNPDHVLEIVLETVLQFLTSRRDRNAASLVCKSWWRTDALTRSELFISNCYAISPRRVVSRFSRILSVTIKGKPRLADFDMLPADWGAHFSQWLTAFSTAYPWLEKVHLKRMSVTDDDLSLLGDSFAAFKELVLVSCEGFGTPGLAAVATKCRLLRVLDLEESLVDINVSDYSGIVDWISCFPEGETHLESLVFDSVFSPINLEALEKLVARSPSLKRLRVNGHVKIFHLYRLMHIAPHLTDLGTGSFDVPEDTEDDELVFESPFAASKSLVCLSGFRDILPEYLPDIYPVCGNLTFLDFQYADIIDTDQIKSVVSRCHKLQTLWVRDAIFDEGLQVVAQTCKDLRELRVYHLHASDGVEAPVSEVGLEAISRGCRKLQYIMFFCQRMTNAAVVALSRNCPNLVVFRLCIIGRYMPDALTQPPMDEGVGAIVMNCKKLTRLDVSGFLTDRAFSYIGKYGKLIRTLSVNFAGDTDLGLKNVLQGCTNLQKLEIRDGPFGDGALCCGLQHFYNMRFLWMSSCKVTRQACQAIAQTLPHLVLEVINTAQDPVDDVELLYMYRSLDKPRDDAPKLVTVLH* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3419 595 Gene3D - 15 61 - -
Tpr3g3419 595 PANTHER F-BOX PROTEIN FBX14 15 593 - -
Tpr3g3419 595 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 15 593 - -
Tpr3g3419 595 SUPERFAMILY RNI-like 292 543 - -
Tpr3g3419 595 Pfam Transport inhibitor response 1 protein domain 83 128 IPR041101 -
Tpr3g3419 595 Pfam F-box 23 62 IPR041567 -
Tpr3g3419 595 SUPERFAMILY RNI-like 103 373 - -
Tpr3g3419 595 SMART LRR_CC_2 454 477 IPR006553 -
Tpr3g3419 595 SMART LRR_CC_2 361 393 IPR006553 -
Tpr3g3419 595 SMART LRR_CC_2 145 170 IPR006553 -
Tpr3g3419 595 SMART LRR_CC_2 394 418 IPR006553 -
Tpr3g3419 595 Gene3D Ribonuclease Inhibitor 63 594 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3419 Tpr-Chr3 37707639 37711414 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3419 - - aprc:113865934 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3419 3 37707639 37711414 Tpr3g3419 3 37707639 37711414 ECH