Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3414 ATGGATTCCGTTCCTTATTTCGACGGAAACATCCACAATATTCTCGATACTCGACACCTTCTTCATCCTCGCCACGATGTTAATCAGAGTTTGCAGACACACTCCTCTTTGATTCGAAGACTTTCTCAAGAAAAAGAGTTAGAGGGACATCTTGGTTGTGTCAATACTATTGCTTGGAATTCAAAAGGTTCATTATTGATATCCGGATCAGATGATACACGGATGAATATTTGGAGCTATTCCGGGCAGAAGCTATTGCATTCAATTGACACTGGACATACTGCAAATATATTCTGTACTAAGTTCATACCAGAAACTTCTGATGATCTTGTTGCATCTGGAGCTGGAGATGCTGAAGTTCGGTTATTCAATAGGTCTCGCATAAGTGGGAATGGACTCAATGATATTCCCATTGTTCCATCGGCACTTTACCAATGCCACACTCGTAGAGTCAAGAAATTGGCTGTTGAAAATGGAAATCCCAATGTGGTATGGAGTGCCAGTGAAGATGGAACCTTAAGACAACACGATTTCCGGGAAGGTACCTCTTGTCCTCCTGCAGGATCTCCACACCAAGAGTGTCACAGTGTCCTACTTGACTTACGGAATGGAGCTAAAAGGTCCCTTGCTGATCCTCCTAAACAAGTCCTTGCTTTAAAATCTGTTGATATAAGTTCAACTAGACCTCATTTGCTCCTTGTTGGCGGGAGTGATGCCTTTGCACGTCTGTATGATAGAAGGATGCTACCACCTCTAAGCTCCTGTGGGAAAAGAATGCCTCCACCTCCTTGTGTTAATTATTTCTGCCCAATGCATCTTTCTGATCGTGGACATCCAAGTTTGCACTTAACTCATGTTACATTTAGTCCTGATGGATCTGAGGTTCTCCTTAGCTATAGTGGAGAGCATGTTTACTTGATGAATGTAAATAATGCTGGAGCGAATGAGGTGCAATATACTTCAGGAGATGTTTCAAAGCTGACGACTTACTCTCCAATAGTTAATGGGGTAGAGTTGCAGCCTTTTGTGTCAAATGTCTTCCCAAATGGTTTCAATACTAAAAAGAACATCGCTGCCAAGCTTGACAAGTGTAGGAAGCTAATAAAATATGCTAAGAAGTCATTGGAGGAGGGGGCACCCTATTATGGAATTGAGGCATGTAATGAAGTTTTGAATGGCTACAATCATATTATTGGGCCTGCACTAAAACATGAATGCTTGTGTACTCGTGCTGCACTATTGCTTAAGAGGAAGTGGAAAAATGATGCTCATATGGCTATAAGAGACTGCCACACTGCTAGGAAAATCGATAAATCTGCATATAAACCACTTTACTACATGTCAGAAGCATTGTCTCAGTTGGGAAAACACAAAGAAGCTTTGGATTTTGCTGTTGCTTCCCAGTCGCTGGCCCCATCCAAATCTGAAGTTGCTGAAAGAGTGGAGAAGGTGAAGAAGGATATTGTTCTAGCTGAAACTGAAAAAAATAGTAAGACAAATGATGGAGCGTCAAGGATTGACGGAAGAGGTGGAAGAATGCTATCATTAAGCGACATTCTCTACCGATCTGAGGCTAATAGTGATACTTCACAAGATGGTCCGAGATCTGACAGGGATGATTCTGATTATGACGAGGAAATGGAGTTGGGCTTTGAAACATCAATATCTGATGACGAGGAACATGATTCTGATTCAAATATTCTTCATGGGAATTTGAATCTTAGAATTCATCGAAGAGGTGACTCGACGGAAAACGTTGGTGCAAGTGGCTCGTGCGAATCACCCTCGTCGTCATCATCACAGAATGGTAGAGCGTCATACCAGCCTGAAGCGGCCATTGATATGAAGCAGAGATTTATTGGGCACTGCAATGTGGGGACTGATATAAAACAGGCCAATTTTCTTGGTCAAAGAGGTGAATATGTTGCCAGCGGAAGTGATGATGGCAGATGGTTTATTTGGGAAAAGCGGACTGGTAGACTTATGAAAATATTGAGTGGCGACGAATCTGTTGTAAATTGCGTACAATGTCATCCATTTGATTTTGTTGTGGCAACCAGTGGAATTGATAGCACAATAAAGATATGGACTCCAAGTGCTCCTGTTCCATCTTCTGTAGCTGGTGGTTCTGCAGGACCAGAAACTGGTGATGTGTTGGTTGCTATGGAGAATAATCAACAAAAGTTATCCCGTAATAGGGATTCAATCCTGCCCTTTGAACTCTTAGAACCATTTAGAATGCACGAGTTTCCTGAAGGATCACTACGCTTGCGCCCTTTTGAATGTGCCCAAAGCTAA 2298 0.4217 MDSVPYFDGNIHNILDTRHLLHPRHDVNQSLQTHSSLIRRLSQEKELEGHLGCVNTIAWNSKGSLLISGSDDTRMNIWSYSGQKLLHSIDTGHTANIFCTKFIPETSDDLVASGAGDAEVRLFNRSRISGNGLNDIPIVPSALYQCHTRRVKKLAVENGNPNVVWSASEDGTLRQHDFREGTSCPPAGSPHQECHSVLLDLRNGAKRSLADPPKQVLALKSVDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSCGKRMPPPPCVNYFCPMHLSDRGHPSLHLTHVTFSPDGSEVLLSYSGEHVYLMNVNNAGANEVQYTSGDVSKLTTYSPIVNGVELQPFVSNVFPNGFNTKKNIAAKLDKCRKLIKYAKKSLEEGAPYYGIEACNEVLNGYNHIIGPALKHECLCTRAALLLKRKWKNDAHMAIRDCHTARKIDKSAYKPLYYMSEALSQLGKHKEALDFAVASQSLAPSKSEVAERVEKVKKDIVLAETEKNSKTNDGASRIDGRGGRMLSLSDILYRSEANSDTSQDGPRSDRDDSDYDEEMELGFETSISDDEEHDSDSNILHGNLNLRIHRRGDSTENVGASGSCESPSSSSSQNGRASYQPEAAIDMKQRFIGHCNVGTDIKQANFLGQRGEYVASGSDDGRWFIWEKRTGRLMKILSGDESVVNCVQCHPFDFVVATSGIDSTIKIWTPSAPVPSSVAGGSAGPETGDVLVAMENNQQKLSRNRDSILPFELLEPFRMHEFPEGSLRLRPFECAQS* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3414 765 Gene3D Tetratricopeptide repeat domain 349 488 IPR011990 GO:0005515
Tpr3g3414 765 MobiDBLite consensus disorder prediction 523 542 - -
Tpr3g3414 765 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 47 79 - -
Tpr3g3414 765 MobiDBLite consensus disorder prediction 582 607 - -
Tpr3g3414 765 SUPERFAMILY TPR-like 402 477 IPR011990 GO:0005515
Tpr3g3414 765 Gene3D - 613 748 IPR015943 GO:0005515
Tpr3g3414 765 MobiDBLite consensus disorder prediction 584 607 - -
Tpr3g3414 765 ProSiteProfiles Trp-Asp (WD) repeats profile. 47 88 IPR001680 GO:0005515
Tpr3g3414 765 SMART WD40_4 82 124 IPR001680 GO:0005515
Tpr3g3414 765 SMART WD40_4 612 655 IPR001680 GO:0005515
Tpr3g3414 765 SMART WD40_4 266 308 IPR001680 GO:0005515
Tpr3g3414 765 SMART WD40_4 658 697 IPR001680 GO:0005515
Tpr3g3414 765 SMART WD40_4 212 245 IPR001680 GO:0005515
Tpr3g3414 765 SMART WD40_4 137 177 IPR001680 GO:0005515
Tpr3g3414 765 SMART WD40_4 40 79 IPR001680 GO:0005515
Tpr3g3414 765 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 18 764 IPR045151 -
Tpr3g3414 765 Coils Coil 474 494 - -
Tpr3g3414 765 ProSiteProfiles Trp-Asp (WD) repeats profile. 665 696 IPR001680 GO:0005515
Tpr3g3414 765 PANTHER WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1 18 764 - -
Tpr3g3414 765 Gene3D - 25 131 IPR015943 GO:0005515
Tpr3g3414 765 Pfam WD domain, G-beta repeat 660 696 IPR001680 GO:0005515
Tpr3g3414 765 Pfam WD domain, G-beta repeat 45 79 IPR001680 GO:0005515
Tpr3g3414 765 Gene3D - 132 332 IPR015943 GO:0005515
Tpr3g3414 765 SUPERFAMILY WD40 repeat-like 40 696 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3414 Tpr-Chr3 37643520 37655427 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3414 K11807 - gmx:100793917 1274.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3414 3 37643520 37655427 Tpr3g3414 3 37643520 37655427 ECH