Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3408 ATGACCAACACAACTGCCGAATTGTCTCAGGGAAATAATGGTGCCCCTCCCAATAACCAACCTGGACAACCAGAGCATCAGAATTCTCGTGGTTCCAACAACAACAATTCCACCAACAATTTGATTTTCAAGAGTGGACCACTTTTCATATCTTCCAAAGGAATTGGATGGACATCCTGGAAGAAAAGGTGGTTCATTTTAACACAAACTTCACTTGTTTTCTTCAGAAGTGATCCAAATGCCGTCCCTGTGAAGGGAAATGAAGTGAATTTGACCCTTGGCGGCATTGATCTCAACAATTCAGGCAGCGTTATTGTTAAAGCAGATAAGAAACTTTTGACTGTACAATTTCCCGATGGTCATGATGGACGCGCTTTCACACTTAAGGCTGAAACTGCAGACGACTTATACGAGTGGAAGACTGCTCTCGAGAAAGCATTGGCACAAGCACCAAGTGCTGCCAACCCGGCGGAACAAAATGTGAATGAAAAAGAACCAACCAAATCTACTGTAATTGGCCGGCCAATTTTACTTGCATTGGAAGATGTCGACGGAACTCCATCTTTTTTGGAGAAAGCGCTGAAATTTCTGGAAGATCATGGATCCAGGGTAGAAGGGGTCTTGCGACAAGCAGCTGATGTTGATGATGTTGAACGTCGAGTTCGGGAATATGAACAAGGAAAAGTTGAGTTTGCTCCGGATGAAGATGCACATGTCATTGGTGATTGTGTTAAGCATGTTCTTCGAGGATTGCCATCTTCTCCAGTACCTGCATCTTGCTGTAAGGCACTGTTAGAAGCTTGCCGAACTGATCGTAGTGTTAGGGTTGCTTCTATGCGCGCAGCGATAAATGACACTTTCCCTGAACCAAACCGCCGCTTATTGCAAAGACTACTGTTGATGATGCAATCTGTGGCTTCACAGAAAGCTGTAAACAAAATGAGTTCTTCAGCTGTGGCAGCTTGCATGGCACCATTACTTCTCCGTCCCCTTCTAGCTGGAGAGTGTGAGATCGATAATGATTTTGATGTAGGTGGTGATGGTTCTGTTCAACTTTTACAAGCAGCTGCAGCTGCTAACCATGCCCAAGCAATTGTCATAACTTTATTAGAAGAATATAGCAGCATATTCGGGGAAGGTTCTGCATCGCCCGATATATACACTGACTCAGAAGATGAAAGTGGATCCGAGAGCGAGGAGGGTTCTGATGATGATATGTCCTATGATGAGGATTATGACGATGAACAAGATGAATCAATACATGAGTCTGATGAAGAGGAAGATGACATTGTCAGCGGCGGATCCTACACTGAAACTGGATCTGAGGCTGATGATTATGATGACAAGGATCACGATCATTCTCATTCAAGTTCAAGATCCTCAGATGTGAGCGAAGAAATTAAGGTCGATCAAAAGTCAATAAAGTCACGTGAAGGCTCACCGACTCAACATGAAAACACCAAAATCAGTGAAAAGGTCATGAGTCCAAAGAAGGCTGCTAATGTAGATCAGTCCAAGTCCAATAAGCCTGCTGATACAGTTGGAGAAGCTTCCGCTGATCTAGCTGGTATGCATAATTCTCCTAGCCCTTCACATATGAAAAAATCTGCAACCATGTCAAATGGCCCAGCACCTCGGCACCGAAACACGTTGGGGCGCACCTCTGCAAGGAAGAACCTCTCCATGGAATCCATTGATCTTCCTATTGAAGAGGATGATGAAATTGAAAGGCTCGAAGCTGCTAGGAATGAACTGCAATCCCAAATTGCAAATGAGGTGAAGGCAAATGAAAAGTTTCAATCTAAGATAGAGGAACGTAAGAAAGACTTGCAAGAGCGGCGTTTGCAACTTGAGCAAGATGTGGCTAAACTGCATGAACAGCTGCACAAGGAGAAGAGTTCTCGGGCAACTCTTGAGACTAGGGCAGAACTTGAGGAATTAGCTCTGGTAGAAGTCGATCTTTCCAACTTAGAGCGGATGGTTGAGGAGCTTGGGAAGCGGCTTAATATTAAAGTTGAGCGTAATCAAGGATCTGCTTCAGATATCAGTAAAACGTCACGTCAATTATCAAATAAGGAAAGAAAAATGAAACATAAGGGAGATGCTGATGTTGCTGCCACATCACAATCTGAAAAGTCAGTAAGCAAGGATACTCATCTTACTGGAGGAGAAAATGAAACTGAGAGAAAGCCAGAACCAAACAAACAGCCACCACCTAGTACCAAGAGATCTTCTAGTTCAAAGGGTGAGGTGAGCCGAAATCAAGCTGCAAACGAGCTACAAAACGCGGATAGAGGCCGAGAGTCGAGTCAGTCTTCACGCAACCTGGATAAAGGAAAAGGATCTGAGCGTCACCAACCACTTCCATCCCCAAAAGGTAAGCCTCAAGGATCTGATGTGCCAAACCCAGAAAAGGTTAGAGTCATAGACAGTTCCCCGTCACTCTCGGATAAAAGATCAAGCAAAGGTAAATCAAATCAGAATTCTGAGAAACTAAAAAAATCAGATAGTCAGCCAGGCTACCGCTCAGAAGGATGGGATCAACATCCAGCATACTTGGAAAGAGGAAGGTCAGACGGCCATAAACAGAATTTTAATGTGGATAAAGGTCGATGA 2616 0.4404 MTNTTAELSQGNNGAPPNNQPGQPEHQNSRGSNNNNSTNNLIFKSGPLFISSKGIGWTSWKKRWFILTQTSLVFFRSDPNAVPVKGNEVNLTLGGIDLNNSGSVIVKADKKLLTVQFPDGHDGRAFTLKAETADDLYEWKTALEKALAQAPSAANPAEQNVNEKEPTKSTVIGRPILLALEDVDGTPSFLEKALKFLEDHGSRVEGVLRQAADVDDVERRVREYEQGKVEFAPDEDAHVIGDCVKHVLRGLPSSPVPASCCKALLEACRTDRSVRVASMRAAINDTFPEPNRRLLQRLLLMMQSVASQKAVNKMSSSAVAACMAPLLLRPLLAGECEIDNDFDVGGDGSVQLLQAAAAANHAQAIVITLLEEYSSIFGEGSASPDIYTDSEDESGSESEEGSDDDMSYDEDYDDEQDESIHESDEEEDDIVSGGSYTETGSEADDYDDKDHDHSHSSSRSSDVSEEIKVDQKSIKSREGSPTQHENTKISEKVMSPKKAANVDQSKSNKPADTVGEASADLAGMHNSPSPSHMKKSATMSNGPAPRHRNTLGRTSARKNLSMESIDLPIEEDDEIERLEAARNELQSQIANEVKANEKFQSKIEERKKDLQERRLQLEQDVAKLHEQLHKEKSSRATLETRAELEELALVEVDLSNLERMVEELGKRLNIKVERNQGSASDISKTSRQLSNKERKMKHKGDADVAATSQSEKSVSKDTHLTGGENETERKPEPNKQPPPSTKRSSSSKGEVSRNQAANELQNADRGRESSQSSRNLDKGKGSERHQPLPSPKGKPQGSDVPNPEKVRVIDSSPSLSDKRSSKGKSNQNSEKLKKSDSQPGYRSEGWDQHPAYLERGRSDGHKQNFNVDKGR* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3408 871 CDD PH 44 143 - -
Tpr3g3408 871 MobiDBLite consensus disorder prediction 739 769 - -
Tpr3g3408 871 Pfam PH domain 44 147 IPR001849 -
Tpr3g3408 871 MobiDBLite consensus disorder prediction 442 485 - -
Tpr3g3408 871 MobiDBLite consensus disorder prediction 770 787 - -
Tpr3g3408 871 SUPERFAMILY GTPase activation domain, GAP 186 379 IPR008936 GO:0007165
Tpr3g3408 871 MobiDBLite consensus disorder prediction 381 567 - -
Tpr3g3408 871 SMART RhoGAP_3 184 374 IPR000198 GO:0007165
Tpr3g3408 871 Coils Coil 571 627 - -
Tpr3g3408 871 MobiDBLite consensus disorder prediction 687 705 - -
Tpr3g3408 871 MobiDBLite consensus disorder prediction 390 432 - -
Tpr3g3408 871 CDD RhoGAP 187 325 - -
Tpr3g3408 871 SUPERFAMILY PH domain-like 14 148 - -
Tpr3g3408 871 MobiDBLite consensus disorder prediction 1 32 - -
Tpr3g3408 871 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 8 770 - -
Tpr3g3408 871 MobiDBLite consensus disorder prediction 529 561 - -
Tpr3g3408 871 MobiDBLite consensus disorder prediction 823 840 - -
Tpr3g3408 871 SMART PH_update 42 150 IPR001849 -
Tpr3g3408 871 Coils Coil 647 674 - -
Tpr3g3408 871 Gene3D Rho GTPase activation protein 154 378 IPR008936 GO:0007165
Tpr3g3408 871 MobiDBLite consensus disorder prediction 717 736 - -
Tpr3g3408 871 MobiDBLite consensus disorder prediction 667 871 - -
Tpr3g3408 871 ProSiteProfiles PH domain profile. 41 148 IPR001849 -
Tpr3g3408 871 ProSiteProfiles Rho GTPase-activating proteins domain profile. 178 377 IPR000198 GO:0007165
Tpr3g3408 871 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 8 770 - -
Tpr3g3408 871 MobiDBLite consensus disorder prediction 848 871 - -
Tpr3g3408 871 Pfam RhoGAP domain 187 330 IPR000198 GO:0007165
Tpr3g3408 871 Gene3D - 28 149 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3408 Tpr-Chr3 37585819 37594352 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3408 - - gmx:100817373 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3408 3 37585819 37594352 Tpr3g3408 3 37585819 37594352 ECH