Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3405 ATGAACATTAAATTGGCCACGGCCTTAACAATTTGCTATGTAATTTACATAAGCAAAATCAATGCAATTGATCCATGTGCATCTCAACCAGATGACTCTGATCTTAATGTAATTCCCATGTATGGAAAATGCTCACCATTCAACCCACCCAAAGCAGATTCATGGGACAACAGAGTCATAAACATGGCCTCCAAAGATCCAGCCCGGATGAGCTACTTATCCACATTAGTAGCCCAAAAAACCGCCACTTCGGCTCCAATTGCTTCGGGCCAGACCTTCAACATTGGCAACTATGTTGTTCGGGTCAAAATCGGAACACCGGGCCAACTTCTTTTCATGGTTCTTGACACAAGTACCGACGAGGCTTTTGTCCCGTCCTCTGGCTGCATTGGTTGCTCCGCGACAACTTTCTATCCTAATGTTTCCACTAGTTTTGTCCCATTGGATTGTTCCGTTCCACAATGTGGTCAGGTCCGTGGACTTTCGTGCCCAGCCACGGGCTCTGGCGCGTGTTCCTTTAACCAATCATATGCTGGCTCCACTTTCTCCGCCACACTTGTTCAAGATTCACTTAGATTAGCTACGGATGTTATCCCTAGCTATTCTTTTGGAAGCATTAATGCTATCTCCGGTTCTTCTGTTCCAGCCCAAGGACTTTTGGGTTTGGGCCGTGGCCCGTTATCTTTGTTATCCCAATCCGGGGCAATTTATTCGGGTGTGTTCTCCTACTGTCTTCCTAGTTTTAAATCTTACTATTTTTCCGGGTCACTTAAACTCGGACCCGTGGGTCAACCCAAAAGCATTCGAACCACGCCACTTCTTCGCAATCCTCACCGTCCATCTCTCTACTACGTCAATTTAACCGCAATCAGCGTGGGCCGTGTATACGTTCCTCTACCAAGCGAACTTTTAGCGTTCAACCCAAGTACCGGAGCTGGAACCATAATTGATTCAGGTACGGTCATAACCCGTTTTGTGGAACCCATTTACAACGCAATCAGGGATGAATTCAGGAAACAAGTGACGGGTCCTTTTTCAAGCTTAGGAGCATTCGACACATGTTTTGTGAAAAACTACGAAACATTAGCACCGGCTATTACATTGCATTTCACGGATTTGGATCTAAAATTACCATTGGAAAATAGTTTGATTCATAGCAGTTCAGGATCATTGGCTTGTCTTGCAATGGCAGCTGCACCAAGTAATGTGAACTCAGTATTGAATGTGATTGCAAATTTTCAGCAACAGAATTTGAGGGTTTTGTTTGATACCGTGAATAATAAGGTTGGTATTGCACGTGAACTTTGTAACTAG 1314 0.4452 MNIKLATALTICYVIYISKINAIDPCASQPDDSDLNVIPMYGKCSPFNPPKADSWDNRVINMASKDPARMSYLSTLVAQKTATSAPIASGQTFNIGNYVVRVKIGTPGQLLFMVLDTSTDEAFVPSSGCIGCSATTFYPNVSTSFVPLDCSVPQCGQVRGLSCPATGSGACSFNQSYAGSTFSATLVQDSLRLATDVIPSYSFGSINAISGSSVPAQGLLGLGRGPLSLLSQSGAIYSGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNLTAISVGRVYVPLPSELLAFNPSTGAGTIIDSGTVITRFVEPIYNAIRDEFRKQVTGPFSSLGAFDTCFVKNYETLAPAITLHFTDLDLKLPLENSLIHSSSGSLACLAMAAAPSNVNSVLNVIANFQQQNLRVLFDTVNNKVGIARELCN* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3405 437 Pfam Xylanase inhibitor N-terminal 98 260 IPR032861 -
Tpr3g3405 437 Gene3D Acid Proteases 74 260 IPR021109 -
Tpr3g3405 437 ProSiteProfiles Peptidase family A1 domain profile. 98 432 IPR033121 -
Tpr3g3405 437 Gene3D Acid Proteases 261 437 IPR021109 -
Tpr3g3405 437 PANTHER ASPARTYL PROTEASE AED3 11 437 - -
Tpr3g3405 437 PANTHER ASPARTYL PROTEASE-RELATED 11 437 IPR001461 GO:0004190|GO:0006508
Tpr3g3405 437 Pfam Xylanase inhibitor C-terminal 283 432 IPR032799 -
Tpr3g3405 437 SUPERFAMILY Acid proteases 91 436 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3405 Tpr-Chr3 37576513 37578310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3405 89 437 Miscellaneous Gene Families AT1G77480 26.992 5.78e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3405 - - gmx:100816307 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3405 3 37576513 37578310 Tpr3g3405 3 37576513 37578310 ECH