Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3392 ATGAACGAGTCTCCGCGTAAAGATCTACAAGTCTTCGATTTCAATGAACAAGATCAGATTAACACCGATAATCACCTTTTCAACAAAATCCCTAATCACGATGCTCAGATCAACGAGGTTGGCGTCAAGAATGTCCCCAGTATTCCTTATGTTGACATTGGTGTAGATTTGGAAACAGGTTGTTCAAACCCCTCTTTCAAAACAATGGAAGATACATTTGATAGCAGAGTGGAGAATTCTGAGTTAGGAGATGGCAAACAATCAAACTCCAATAGTCAGGAAAATCAACGTCATTTTAAAATAGATGTTGATTACTATGACCGGCCAGAGAATAGGGATACTAGTGGTTGTGCATCTACACCTGAGACGAGCCAAATTGGTCCTTCAGGGTCTCCATCCAGTAAAGAATCTGTTGATGTTAGTTCTGATGCTGATGATTGCATGAACTATGAGAGTGCTCCAACAAATGCTGATTCTGATATTGCAGAGAATGGTGTATTTCATCTTTCATTGAATGGTTGTGGATTGGATGGTGCACATGCATCTGACATGGATAACATGAATACAGATGTTGTTCTCTATCCTGATTATATAATTTACCAGGATAATTATTATATGGAGCCAATGTTAACTTTTTCACATCGCTGCATCAATATCAATGTTTCAACTGCATGTATGAAGCAAGAGGCCTTTAATCTTGAATGGGGACTTGATGACCTCGTTGATATTAAGTGTCAGTGGTTTCAAAATAGTGGAACGGTCATCATAAAGATTAATGTAATATCAAGGAATGCAATTCAGATAGATCATGTAAGCAACACTTCAGGCATTGAGGAATTGGAGATTGCAGTTGTTGATTCCAATTGGTCCCTGATACATAGACAGATCACATCTCTTAATGTGAAATACTTGGCTATTTGGAAAATGATGCTTAATATGGATGTAGAAGATAGCGAAACGAAATCGAGTGGATCAAGAGGCTACTTTCCTAATTTCGAGGAGTCTTTTGATGAAGTTGTCTATCCTAAAGGGGATCCAGATGCTGTTTCACTAAGCAAGAGAGACTTTGATCTATTACAACCAGACACATTCATTAATGACACAATAATTGACTTTTACATCCAGCATCTGAAGAATCAGATACAAGAGGAGGAAAAACCTAGATTTCATTTTTTTAATAGTTTCTTCTTTAGAAAGCTGGCTGATTTGGACAAAAATCCATCTAGTGCTTCAGATGGAAAAGCAGCGTTTCTACGTGTTCGTAAATGGACAAGAAAAGTTAGTTTATTTGAAAAGGATTACATCTTCATTCCTGTGAACTTCAATCTTCATTGGAGTTTAATAGTCATATGTCATCCTGGTGAATTGGTTAATTTTAATGATAAAGAGTTGGGCAACTCGCTTAAGGTACCGTGTATATTACATATGGATTCTATAAAAGGAAATCACAGTGGTCTGAAAAACCTGCTGCAAAGTTACTTGTGGGAAGAATGGAAAGAGAGACATAAAGATGCATGTGAAGATCTTTCAGCACGATTTTCAAATTTGCGTTTTCTCCCCCTTGCGTTGCCACAGCAAGAAAACTCATTTGATTGTGGACTCTTTCTGCTGCACTACCTAGAGCTCTTCCTTGCTGAAGCTCCTCTTACTTTCAATCCATTCAAAGTAACCAAGTTTTCCAATTTCCTCAATGTGGACTGGTTTCTGCCTGCTGAAGCTTATCTCAAGCGAACACTGATCCAGAAGTTGATCTCTGAACTTGTCGAAAACCACGGTTCACATGAAATCTCGTCCTCCGACTGTAGTGATGACCACCAGTACATAGAAAATAATGAGAATGGAACTGGCTTTGAGCAACCCGAAGTCAACAGGGAGTCAAAAACTTCCCTTGGTGGGCAGGGAATAGAAATGACTCTATTGTCTGGATCATCCTCTTTGGATCCTCAATCTTTTAACAACTCAGGAATGGTTCTTAAGGATCTTTTTGAGTCAGGTGCTACAGGAGCAACATTGGCACAGTGCCATTCTTTTGGCCAGCGATCATCTGATTATCGTTTCAACAGTTCAATATTTTCGATGGAGGAAGACACAGATCTTGGTGAACAATTTATGTATTTGGCCACAGACACCAACTTTGCACAAGTGGCTGAAGTTACACCAACTTTGCCTTGCCTTCCTAGGGATTGTGGAAATGGGACTCGCATACCAGAATTCTGTCTGCAAGAGGCTCTATCATCTCCAAGTAGTGCCTCGGAGGATACAGAAGACATAGGGGTCACTGAAAATTGTCCCGACAATGGGAATGAACCCATGGCATCTAATGAGGCAGAACAAGGTGAACAAATTTGTTCACCCATAGAAAATACCGAGCATTTTATAGATATTTCTGGTTCTGCTAGCAACGATGTCGTGGGAGTTTCTCACGACTCCATTATGAAATGTGATGATTACAAAAATGGAGATATTCACTCTCCCTGTCAGGAAACTCCTACAATAGCATGGCATCAAGTTTCTGATGCAGTGGATGAGGAGGCCAAATGTGATGATGGTCAGATGATTGATGGCACAGAAGCTAATATTTGTGAGGAACAAGCTGCAAAGAGGAGGCGGGTTATGCCTCCTCAGTCAGAAGTGAGGGAATTGTGA 2646 0.3991 MNESPRKDLQVFDFNEQDQINTDNHLFNKIPNHDAQINEVGVKNVPSIPYVDIGVDLETGCSNPSFKTMEDTFDSRVENSELGDGKQSNSNSQENQRHFKIDVDYYDRPENRDTSGCASTPETSQIGPSGSPSSKESVDVSSDADDCMNYESAPTNADSDIAENGVFHLSLNGCGLDGAHASDMDNMNTDVVLYPDYIIYQDNYYMEPMLTFSHRCININVSTACMKQEAFNLEWGLDDLVDIKCQWFQNSGTVIIKINVISRNAIQIDHVSNTSGIEELEIAVVDSNWSLIHRQITSLNVKYLAIWKMMLNMDVEDSETKSSGSRGYFPNFEESFDEVVYPKGDPDAVSLSKRDFDLLQPDTFINDTIIDFYIQHLKNQIQEEEKPRFHFFNSFFFRKLADLDKNPSSASDGKAAFLRVRKWTRKVSLFEKDYIFIPVNFNLHWSLIVICHPGELVNFNDKELGNSLKVPCILHMDSIKGNHSGLKNLLQSYLWEEWKERHKDACEDLSARFSNLRFLPLALPQQENSFDCGLFLLHYLELFLAEAPLTFNPFKVTKFSNFLNVDWFLPAEAYLKRTLIQKLISELVENHGSHEISSSDCSDDHQYIENNENGTGFEQPEVNRESKTSLGGQGIEMTLLSGSSSLDPQSFNNSGMVLKDLFESGATGATLAQCHSFGQRSSDYRFNSSIFSMEEDTDLGEQFMYLATDTNFAQVAEVTPTLPCLPRDCGNGTRIPEFCLQEALSSPSSASEDTEDIGVTENCPDNGNEPMASNEAEQGEQICSPIENTEHFIDISGSASNDVVGVSHDSIMKCDDYKNGDIHSPCQETPTIAWHQVSDAVDEEAKCDDGQMIDGTEANICEEQAAKRRRVMPPQSEVREL* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3392 881 Gene3D - 389 520 - -
Tpr3g3392 881 MobiDBLite consensus disorder prediction 113 138 - -
Tpr3g3392 881 ProSiteProfiles Ubiquitin-like protease family profile. 349 543 IPR003653 GO:0006508|GO:0008234
Tpr3g3392 881 Pfam Ulp1 protease family, C-terminal catalytic domain 364 564 IPR003653 GO:0006508|GO:0008234
Tpr3g3392 881 MobiDBLite consensus disorder prediction 111 145 - -
Tpr3g3392 881 Gene3D - 341 585 - -
Tpr3g3392 881 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 8 879 - -
Tpr3g3392 881 SUPERFAMILY Cysteine proteinases 341 587 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3392 Tpr-Chr3 37417991 37428218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3392 K08596 - gmx:100800444 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3392 3 37417991 37428218 Tpr3g3392 3 37417991 37428218 ECH