Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3379 ATGGGTTCACTACCCAATTTGGAAAGTCCTCTCCAAACTTCAAGAATTTCCACGGTTGTTCCTGCAACCCCACGAGGTGAAGAAAATAGTGCATACAACCTTAACTACATGGACTTATTAATGAAACTTCACTATATCCGATCCATTTATATTTTCAATTCTGAATCGGTTCAAAACCTTTCAATATCCGATTTAAAAACTCCAATGTTTCCATTACTTGATTTATACTCACATGTTTCTGGTCGAGTTAGGGTATCCGAGTCCGGAAGAGCGTTTATCAAGTGCAACGACGCAGGAGTGCGCATAGTGGAGTCGCATTGTGATAAAACTGTTGGTGAATGGTTGGATGAAAATGAATACTCTCTTGATGGACTTGTTCATGATCATGTTCTTGGTCCTGATCTTGCTTTTTCTCCTTTGGTTTTTGTCAAGTTCACATATTTTAAATGTGGAGGACTATCAGTGGGACTAAGCTGGGCTCATATCCTAGGAGATGCATTTTCAGCTTTTAAGTTCATTACTAAGTGGAGCCACATACTATCTGGTCAAGCTCCACCAAAATCACTTCACATGCCAAATCTCACCAAACCTCAATTCTTATCAAATTATGATTCTCATAATAATAATCCCATTTCTATCAAAAGGGCAACAATTATTGGGGGGTATTGGCTTAATCCTAATGATAGTTATGTAGCTACTCACACTTTTCACATCACTTCCAAACAACTTCAACATTTGGTTACATCATACACATATTCCAAATCTACCAATATCAACAAAAAATATTTTGAAATTATTTCAGCTATGATATGGAAATGTATAGCACAAATAAAAGGAGATTTTGGACATAAAGTTGTGACAATATGTACTACAAATTTCTCTAATAGGGTTGAAAATGAATTCCCAACAAATGGCTTAGTGTTGAGCAAAATTGAAACAAATTTGTCACCTAAGGAAGTTGATATATTAGAATTAGTAAAACTAATTGTTGAGAAAAAAATAAATGAGAATTATGTATTGGAAAAATTGGTGGAAGAAGGTGAAGGAAAAGATGATTTTATTGTTTATGGAGCAAAATTAACATTTGTTGATTTAGAAGAAGCTGATTTTTATGGAGTAAAGATTAATGGACAAAAACCCATTTTAGCAAATTGTGATTTTCATGGTGTTGGTGATCAAGGAGTTGTTTTGGTTCTTCCTGGACTAGAAGATGATGATGGCAATAATGGAAGGATGATAACAATTTCATTGCCTCAGCAAGAACTTGACCAATTGAAATGTAAACTAGCAAAAGAATGGGGTATATAA 1308 0.3456 MGSLPNLESPLQTSRISTVVPATPRGEENSAYNLNYMDLLMKLHYIRSIYIFNSESVQNLSISDLKTPMFPLLDLYSHVSGRVRVSESGRAFIKCNDAGVRIVESHCDKTVGEWLDENEYSLDGLVHDHVLGPDLAFSPLVFVKFTYFKCGGLSVGLSWAHILGDAFSAFKFITKWSHILSGQAPPKSLHMPNLTKPQFLSNYDSHNNNPISIKRATIIGGYWLNPNDSYVATHTFHITSKQLQHLVTSYTYSKSTNINKKYFEIISAMIWKCIAQIKGDFGHKVVTICTTNFSNRVENEFPTNGLVLSKIETNLSPKEVDILELVKLIVEKKINENYVLEKLVEEGEGKDDFIVYGAKLTFVDLEEADFYGVKINGQKPILANCDFHGVGDQGVVLVLPGLEDDDGNNGRMITISLPQQELDQLKCKLAKEWGI* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3379 435 Pfam Transferase family 15 426 - -
Tpr3g3379 435 PANTHER PROTEIN ECERIFERUM 2 9 433 - -
Tpr3g3379 435 Gene3D - 11 208 IPR023213 -
Tpr3g3379 435 Gene3D - 227 428 IPR023213 -
Tpr3g3379 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3379 Tpr-Chr3 37294443 37297799 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3379 9 426 Acyl Lipid Metabolism Gene Families AT4G24510 40.603 7.40e-103 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3379 - - mtr:MTR_3g100150 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3379 3 37294443 37297799 Tpr3g3379 3 37294443 37297799 ECH