Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3377 ATGCACGGTAGACCTCGCAAACCGTTGAAAGAAGAAGACGAATCAGTTTTATCAGCCAAAGCTGAAAAGCTTCGTTTACTTCAATCTCAGTTCCTCGCCAATCACCAAAATCGCATATATAGCAAAGAAGCATTAGATTTGAGCGCGAAGCTTCTAGAAAATAATCCAGAATGTTACACAGCTTGGAATTACAGAAAACTCGCTGTTCAACACAATCTCTCTCAATCTGATTCCGATTCCGTTGCGTCTCTCTTCGATCAGGAGCTCAAATTGGTTGAAAATGCGTTGAGGAAGAATTTTAAGTCCTACGGTGCTTGGCATCATAGAAAATGGGTGCTCAGCAAGGGGCATTCATCCATAGATCACGAAATGCGGCTTTTGAATGGTTTTCAGAAGGCCGATCCGCGGAATTTTCACGCATGGAATTACCGGAGGTTTGTTACTGATCTAATGAAAAGATCAGATGAGGATGAGTTGAAATACACGGAGGAAGTGATAGGGGAAAATTTTAGTAATTACTCTGCGTGGCATAATAGGAGTGCAATTTTATCTAATTTACTTAAAAGAAAGGCTGAAGGATTTTCACACAAAGAAAAGGTTTTGCAAGAGGAGTATGAACATGTCCGCAATGCTATTTTTACTGACCCAGATGATCAGAGTGGTTGGTTTTATCATCTTTGGCTTATTGATCAAACCGTGAAAAATGGTGCTCCTCTACTTGTTTCATCTTGGCCATCTCGTGGATCTACTATAACACTGAATGGACATGGAAACAACCGTCTTCATGGTTTGTCTCTGTTGAATAGTACACTATCAGGCACTACAACACTTCCCATCATTCTATATTTTAATCAAGCCGTTGAAGGCATCAACTCGTCCACAGTGGCCGTTAAATCTGAAATATTGAAAGAGGATCTTGTTTGGAAACCACTTTCAGTAAACAACTCGAGTACTGCTCAAGTTTGGGTTGTGTACCTAAAACTTGGAAATATGGAGCTCCAACTATCGAAAACCTACTCTATAGAGATCACCATTGGATATTCTGCGGGTATTGTATCTTCAAATGGATATCATTATGGGGACCCTTCCCAAATTGCTTTTGAATTGTGTGTACAGACTGCTCATACAGAACCTGTTGAAGGGCAATATCCAAAGTTGACTTCGTGGAAGGATAGTGATTTCCAAAAAATTGATCATTTTGAAGAATCAAACTTCGTTACATCTACTGATCACCACATTCCAACAACTTCCAATTGGTGCAGGGAGGCAATTGATGAAGAAATAACAAATTATCAGGATTTGTTGTCAGACTGTAAAATTGGAAAGCTTACACTTGCAAGACTTTTGACTGCTCTTGATTCGTTATCACCTGAACATGATAAAAGAAAAAAGCACACCGACGAAATTCTTAAACTTTACACTGAACTGATGAAGTTGGATCCAACACATTCTCTATACTACAAGGATGAGCATAGTCTGGTATTACTTCAGCAGATAACTTCATCTGAAGAGTCTTTACTACCACATTGCCACTACTATAAAGATGCAACGGAAACAAATACTAGTTATGTCTGTCTACGATTACAAAATCTATCGTTGTCACGGATGGGGTCCATCAAGAATTTACTATGGGTGCAAATGCTAGATCTTAGCCACAATGAACTTCGATCAATTGAAGGGTTGGAGGCCATGCAACTTCTATCTTGCTTAAATCTGAGTCATAATAAACTTGGTAGTTTTACTGCTTTGGGGCCTCTCAGATCGCTCAAGTCACTTAAAGTGTTGAATATCTCTCACAATGAGCTAGGCTCTCACTCTATTGACACAAGAAGATATCTCTGCTCTTCTCCTTTAGCACATACTGAAGTATTTGCCTGGGACCGTTTTGAAATCCTTTGCGGCAGTTACAGTGCCACAAAGTTTTGGGAAGCTTTCTTGATCTTTGAAAGCTTGAACTTGACAGATTTGAACATTACAGGAAATGCAGTTGCAGACGAGAACTTCACTTCATTTATCGTCAAAGTTTTGCCTACACTAAAGTACCTAAATGATGAAGAGTTATAA 2064 0.3929 MHGRPRKPLKEEDESVLSAKAEKLRLLQSQFLANHQNRIYSKEALDLSAKLLENNPECYTAWNYRKLAVQHNLSQSDSDSVASLFDQELKLVENALRKNFKSYGAWHHRKWVLSKGHSSIDHEMRLLNGFQKADPRNFHAWNYRRFVTDLMKRSDEDELKYTEEVIGENFSNYSAWHNRSAILSNLLKRKAEGFSHKEKVLQEEYEHVRNAIFTDPDDQSGWFYHLWLIDQTVKNGAPLLVSSWPSRGSTITLNGHGNNRLHGLSLLNSTLSGTTTLPIILYFNQAVEGINSSTVAVKSEILKEDLVWKPLSVNNSSTAQVWVVYLKLGNMELQLSKTYSIEITIGYSAGIVSSNGYHYGDPSQIAFELCVQTAHTEPVEGQYPKLTSWKDSDFQKIDHFEESNFVTSTDHHIPTTSNWCREAIDEEITNYQDLLSDCKIGKLTLARLLTALDSLSPEHDKRKKHTDEILKLYTELMKLDPTHSLYYKDEHSLVLLQQITSSEESLLPHCHYYKDATETNTSYVCLRLQNLSLSRMGSIKNLLWVQMLDLSHNELRSIEGLEAMQLLSCLNLSHNKLGSFTALGPLRSLKSLKVLNISHNELGSHSIDTRRYLCSSPLAHTEVFAWDRFEILCGSYSATKFWEAFLIFESLNLTDLNITGNAVADENFTSFIVKVLPTLKYLNDEEL* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3377 687 Pfam Protein prenyltransferase alpha subunit repeat 201 231 IPR002088 GO:0008318|GO:0018342
Tpr3g3377 687 Pfam Protein prenyltransferase alpha subunit repeat 86 114 IPR002088 GO:0008318|GO:0018342
Tpr3g3377 687 Pfam Protein prenyltransferase alpha subunit repeat 156 186 IPR002088 GO:0008318|GO:0018342
Tpr3g3377 687 Pfam Protein prenyltransferase alpha subunit repeat 42 71 IPR002088 GO:0008318|GO:0018342
Tpr3g3377 687 Pfam Protein prenyltransferase alpha subunit repeat 122 147 IPR002088 GO:0008318|GO:0018342
Tpr3g3377 687 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 40 74 IPR002088 GO:0008318|GO:0018342
Tpr3g3377 687 Gene3D Ribonuclease Inhibitor 509 687 IPR032675 -
Tpr3g3377 687 ProSiteProfiles Leucine-rich repeat profile. 544 565 IPR001611 GO:0005515
Tpr3g3377 687 Coils Coil 684 687 - -
Tpr3g3377 687 SUPERFAMILY L domain-like 518 603 - -
Tpr3g3377 687 Gene3D Protein prenylyltransferase 1 243 - -
Tpr3g3377 687 ProSiteProfiles Leucine-rich repeat profile. 566 587 IPR001611 GO:0005515
Tpr3g3377 687 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 200 234 IPR002088 GO:0008318|GO:0018342
Tpr3g3377 687 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 154 188 IPR002088 GO:0008318|GO:0018342
Tpr3g3377 687 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 1 598 - -
Tpr3g3377 687 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 119 153 IPR002088 GO:0008318|GO:0018342
Tpr3g3377 687 PRINTS Leucine-rich repeat signature 545 558 - -
Tpr3g3377 687 PRINTS Leucine-rich repeat signature 589 602 - -
Tpr3g3377 687 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 84 118 IPR002088 GO:0008318|GO:0018342
Tpr3g3377 687 PANTHER - 1 598 - -
Tpr3g3377 687 SUPERFAMILY Protein prenylyltransferase 17 491 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3377 K14050 - gmx:100807900 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3377 3 37277684 37283489 Tpr3g3377 3 37277684 37283489 ECH