Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3376 ATGGACCCCAAGGAGAAACAAGCGATGTACCGCGATATCGGTTTACAAGTTGTAATGATTCTTGCACTAGTCTTAATCTTCCTCAGCATGCACGGAATTCCACAAAAAATTCTCGCAAAACTCCGAATCCGAAACCGAACCGGAATCAAAGCAAAGCGTCACTTCGTTCGTGGCGCTCAGCTTCTCACACAAGCTAGATCTTCCAAAAACAAATCCAGATCCGCAATCAACAACCTCGCAAACGAAGCATTAACCGAAGCAGAAAAAGCGATCGAACTCGATCCTAAAGACGCTGCTTCTTATCTTCTCAAAGCTATGATTCTCGATCTTCAAGGTTTTCGAACTTCCGCTCTTGAATCGCTCGATGCAGCTTTATCTCCTCTCACTGCTAGTTCTCTTGCAAAAGATGAACGTGGTGATGCGTTGTATAAGAGAGCTGAGTTGAAACTCGCAACGAGTGAACGCGGACGAGTTGACTCGGCTTTAGCTGATTTGACTGAGTCGGTTATTTTGAGTCCTAAGAACGCGAAAGCTTGGTGTGCGTTGGGAGAGTGTTATGAAGGAAAGAAGATGGATGAAGAAGCAAAGAAAGCTTACAAGGAAGCTCATGAGTTGGCGCCAGAATTTTCTGTGCCGGTTGAAGCACTTAACAGCAATGTAACAAAAGATAAAGAGCAGTCTTAA 684 0.4444 MDPKEKQAMYRDIGLQVVMILALVLIFLSMHGIPQKILAKLRIRNRTGIKAKRHFVRGAQLLTQARSSKNKSRSAINNLANEALTEAEKAIELDPKDAASYLLKAMILDLQGFRTSALESLDAALSPLTASSLAKDERGDALYKRAELKLATSERGRVDSALADLTESVILSPKNAKAWCALGECYEGKKMDEEAKKAYKEAHELAPEFSVPVEALNSNVTKDKEQS* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3376 227 PANTHER - 10 219 - -
Tpr3g3376 227 Gene3D Tetratricopeptide repeat domain 133 227 IPR011990 GO:0005515
Tpr3g3376 227 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Tpr3g3376 227 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 10 219 - -
Tpr3g3376 227 Gene3D Tetratricopeptide repeat domain 36 132 IPR011990 GO:0005515
Tpr3g3376 227 SUPERFAMILY TPR-like 79 210 IPR011990 GO:0005515
Tpr3g3376 227 SMART tpr_5 176 209 IPR019734 GO:0005515
Tpr3g3376 227 SMART tpr_5 139 175 IPR019734 GO:0005515
Tpr3g3376 227 Pfam Tetratricopeptide repeat 176 209 IPR001440 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3376 - - gmx:100799725 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3376 3 37273699 37277658 Tpr3g3376 3 37273699 37277658 ECH