Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3331 ATGAAAAGGCCATTGAAACACCACAACAAGAATCAAGACCCTTTCCAACAATTACCCGATGATGTCGTCCTCCTCATTCTCACCAAGCTCAGCTCAACTTCTTCTTCTCCTTCCCATTTCCTCAACATCCTCTTAACATGCAAAAGATTGAACCGCTTATCTCTTCATCCAATAGTTTTATCAAAAGCTGGACCCAAAGTCCTCTCCGTTAAGCCTCAAAATTGGTCTGATACCTCTCACCGTTTTCTCAAACGCTGTGTTAACGCCGGTAACGTTGATGCCTACTACACTCTTGGAATGATCCTATTTTACTGTCTTCAAAATCGAAGGAGTGGACTATCTCTGATAGCGAAGGCGGCAATGAAGATGCACGCGCCGGCGTTATACTCACTCGCTGTGATTCAGTTCAACGGAAGCGGTGGCACTAAGCAAGACAAAGATCTACGCGCTGGAGTGGCACTTTCTTTACGCGCGTCACTTCTCGGTCATATCGACGCGCTTCGTGAGTTGGGTCATTGTCTTCAAGACGGTTATGGAATCGAGCAGAACGTCACGCAGGGACGACGGTTGTTGGTACAGGCTAACATGCGTGAGCTAGTATTTGTCTTACGCGCTCTTATGTTAGATTCACCTTCACGCGCCGCCAGTTCCTGTCAAGGGAGGTTGACTAGCCTCAGAAACATTACCGTGCCACCGTTGATAAGTGCTAATGTGTATAACATGAACTTGACCGTGCCGGATGTGCATCCGGCGAACGGGTTTTTGAGAGAGTGGTTTGAATCGGGTCGGGGCACATTGGATGATGGGTTAAGGTTGTGTGCACATATTGGATGCGGACGGGCAGAGACGCGGCCACATGAGTTTCGACGGTGTTCCGTGTGTGGTAAGGTGAATTATTGTTCGAGGGGATGTCAATCGCTCGATTGGAAATTGCGGCATAAGACCGAGTGTTCACCGGAATTGTGGTTTAATGAGAATAATGGTGGTGGTGGTGATGTTAATATGGAAAATGACATGGTCGTGGCCCATAACGCAGCTGTTTAA 1044 0.478 MKRPLKHHNKNQDPFQQLPDDVVLLILTKLSSTSSSPSHFLNILLTCKRLNRLSLHPIVLSKAGPKVLSVKPQNWSDTSHRFLKRCVNAGNVDAYYTLGMILFYCLQNRRSGLSLIAKAAMKMHAPALYSLAVIQFNGSGGTKQDKDLRAGVALSLRASLLGHIDALRELGHCLQDGYGIEQNVTQGRRLLVQANMRELVFVLRALMLDSPSRAASSCQGRLTSLRNITVPPLISANVYNMNLTVPDVHPANGFLREWFESGRGTLDDGLRLCAHIGCGRAETRPHEFRRCSVCGKVNYCSRGCQSLDWKLRHKTECSPELWFNENNGGGGDVNMENDMVVAHNAAV* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3331 347 SUPERFAMILY F-box domain 7 66 IPR036047 GO:0005515
Tpr3g3331 347 SUPERFAMILY HCP-like 77 194 - -
Tpr3g3331 347 ProSiteProfiles Zinc finger MYND-type profile. 275 317 IPR002893 -
Tpr3g3331 347 PANTHER MYND DOMAIN-CONTAINING 6 338 IPR044508 -
Tpr3g3331 347 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 6 338 - -
Tpr3g3331 347 Pfam MYND finger 278 317 IPR002893 -
Tpr3g3331 347 Gene3D Tetratricopeptide repeat domain 71 206 IPR011990 GO:0005515
Tpr3g3331 347 Gene3D - 265 321 - -
Tpr3g3331 347 SUPERFAMILY HIT/MYND zinc finger-like 271 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3331 Tpr-Chr3 36719436 36721124 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3331 - - cam:101501389 473.781