Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3330 ATGGAGATCGAGCTCAATAACTTGATCGCCGATCTTCAATCTCTCAATCAATCCCTTCCAGATCCATCTCTTCGTGATGCATTCCATAAGATTCAATCACGCGTTGAGCATATTGCTGATCTTGTTAGGGCTGAACCTGTTCGCCGGACGAAAGTTAAGGATATGAGTGCTGAGGTTGTTGACAGCAATCCGTACAGTCGGCTTATGGCGCTTCAGAGAATGGGAATTGTGGAGAATTATGAGCGGATACGGAATTTCTCCATTGCCATAGTTGGAATAGGTGGTGTAGGAAGTGTAGCTGCTGAGATGCTGACAAGATGTGGTATTGGGCGGCTTTTGTTGTATGATTATGACAAAGTGGAACTTGCAAACATGAATAGGCTCTTCTTTCGTCCTGATCAAGTTGGTATGACAAAGACAGATGCAGCTGTACAAACACTTTCAGATATAAACCCTGATGTTGTGCTTGAGAGCTATACACTGAATATCACAACAGTTGATGGTTTTGAAACCTTTATGTCATCTTTGAAAAATAAGTCATTTTGTCCTGATAAACAAGGTAGCGGTATAGATCTTGTCTTAAGCTGTGTAGATAATTATGAAGCAAGAATGGCTGTTAACCAGGCTTGTAATGAACTGAGCCAGACATGGTTGGAGTCGGGTGTTTCCGAGGATGCCGTTTCTGGTCATATTCAGCTACTTATTCCTGGCGAAACTGCCTGTTTTGCATGCGCTCCTCCTCTTGTTGTAGCATCGGGGATTGATGAGCGTACACTCAAGCGTGAAGGGGTTTGTGCTGCATCTTTACCAACCACCATGGGGGTTGTTGCTGGGCTTCTTGTCCAGAACACACTAAAATTCTTGTTAGGTTTTGGTCAAGTCTCTCCTTATTTGGGATATAACTCTCTTAAGGATTTTTTCCCAACTATGCAAATGAAGCCAAACCCTCAATGTTCAAATGCAGCTTGTTTAAAAAGACAGGGAGAGTACATTCTTGCAAAGCCAGAAAGAGATGCTGCAGCAAAAGCAAAAAAGGAGGCTGAAGGACCATCAGTTGAAGAAGGTCCACTGCACGATGATAACGAATGGAATATAAGTGTCGTTGATGACTGTGAGCCTGATGGTACCAATACCAAAAGTTCAGATGCCCTTCCTGAAGGTCTCACTCATGAACTTCCTACTGCGGATGAATTTCAGAACCTAGTTACTCCCGAAGCTCCAACCAATGACAATGATGACCTTGATGAACTACGAAGGCAACTTGAAGCCATTAATTCTGCATAG 1284 0.4315 MEIELNNLIADLQSLNQSLPDPSLRDAFHKIQSRVEHIADLVRAEPVRRTKVKDMSAEVVDSNPYSRLMALQRMGIVENYERIRNFSIAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPDQVGMTKTDAAVQTLSDINPDVVLESYTLNITTVDGFETFMSSLKNKSFCPDKQGSGIDLVLSCVDNYEARMAVNQACNELSQTWLESGVSEDAVSGHIQLLIPGETACFACAPPLVVASGIDERTLKREGVCAASLPTTMGVVAGLLVQNTLKFLLGFGQVSPYLGYNSLKDFFPTMQMKPNPQCSNAACLKRQGEYILAKPERDAAAKAKKEAEGPSVEEGPLHDDNEWNISVVDDCEPDGTNTKSSDALPEGLTHELPTADEFQNLVTPEAPTNDNDDLDELRRQLEAINSA* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3330 427 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 1 427 IPR045886 -
Tpr3g3330 427 Pfam ThiF family 65 319 IPR000594 -
Tpr3g3330 427 MobiDBLite consensus disorder prediction 336 365 - -
Tpr3g3330 427 MobiDBLite consensus disorder prediction 336 392 - -
Tpr3g3330 427 Gene3D - 82 344 - -
Tpr3g3330 427 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 56 323 IPR035985 GO:0008641
Tpr3g3330 427 CDD ThiF_MoeB_HesA_family 64 312 - -
Tpr3g3330 427 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 88 116 IPR029752 -
Tpr3g3330 427 PANTHER BNAANNG16230D PROTEIN 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3330 Tpr-Chr3 36693911 36699433 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3330 60 175 EF-hand Containing Proteins AT2G30110 32.773 2.21e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3330 K12164 - gmx:100819760 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3330 3 36693911 36699433 Tpr3g3330 3 36693911 36699433 ECH