Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3327 ATGCATAGGAAAATGAATGCAGTCAATCCCAATCCAATACTAATCTTAAAGACAAGACCTCTGAATATTCACATTTATTATTACACTTTCAAACTCACTCGCACTCTCTGCGTCCACTCAACTATGGCTGCCGCCGCCGCCACCACCACCACCACCACTCCTTCCAGATCTCCGCTTCACTCTTCATCTTCTTCTCATTCAACTTTCCCAAAACGAAACACAACCCTCACATTCCCTCTTTCTCCCATTTACATCAAACCTATTCACTCTCGTCCCTTCACCATCCCTACCTCATGCTCCGCCGCACCACCTTCCACCACCACCACAACCACCACCTCGACCGAGCCTCACATCTCTCGTTTCTCCCCAACTGAACCCAGAAAAGGCTCCGACATTCTCGTCGAAGCCTTAGAACGTCAAGGCGTAACGAACGTCTTTGCTTACCCCGGTGGAGCTTCCATGGAGATCCACCAAGCTCTAACCCGCTCCAAAACAATCCGTAACATACTTCCCCGTCACGAACAAGGTGGAGTTTTCGCCGCTGAAGGTTATGCTCGTTCCTCCGGTCTCCCTGGTGTCTGCATAGCCACGTCCGGTCCCGGAGCCACCAACTTAGTCAGCGGCCTTGCCGATGCTTTAATGGATAGCGTCCCTCTCATCGCCATCACTGGTCAAGTTCCCCGGAGAATGATCGGAACTGATGCTTTTCAAGAAACCCCAATTGTTGAAGTAACGAGATCTATCACAAAGCATAACTACCTCATTCTTGATGTTGATGATATTCCTAGGGTTGTGCAAGAGGCCTTTTTTATTGCAACTTCGGGCCGGCCTGGCCCGGTTCTCATCGATGTACCTAAAGATGTTCAACAACAGTTAGCTGTTCCTAATTGGGGTGAGCCCATTAAGCTGACTGGGTATCTTTCTAGGTTACCTAAGATTCCTAATGAGGCTCAATTAGAACAGGTTTTGAGGTTGTTGTTAGAATCTAAAAAACCGGTTTTATATGTTGGTGGTGGTTGTTTGAATTCGAGTCAGGAATTAAACCGGTTTGTTGAATTAACTGGTATTCCTGTTGCTAGTACTTTAATGGGACTAGGTAGTTACCCTATTGATGGTGAACATTCCCTTTCAATGTTGGGTATGCATGGGACTGTTTATGCTAATTATGCTGTTGACAATAGTGATTTGTTGCTTGCTTTCGGGGTTAGGTTCGATGATCGTGTTACTGGGAAGTTAGAGGCTTTTGCTAGTAGGGCTAAGATTGTTCATATAGATATTGATTCAGCTGAGATTGGTAAGAATAAGATTCCACATTTGTCGATTTGTGCGGATATGAAGGTGGCATTGGAAGGTCTTAATAGGGTTTTGGAGAGTAAAGGAATTAAGGGTAAACTTGATTTTGAGTCATGGAGGAATGAGTTGAATGCTCAGAAGTTGAAGTTTCCTCTTGGTTTTAAGACGTTTGAGGATGCGATTTCCCCGCAGTATGCTATTAAGGTGCTTGATGAGTTGACTAATGGTGAGGCTATTGTTAGTACTGGTGTTGGACAACATCAAATGTGGGCTGCTCAGTTTTATAAGTATAAGAGACCTAGGCAGTGGTTAACTTCTGCTGGACTCGGTGCGATGGGTTTTGGATTGCCTGCTGCTATTGGTGCTGCTGTTGCTAACCCTGATGCGATCGTTGTTGATATTGATGGTGATGGTAGTTTTATGATGAATGTTCAAGAGTTGGCTACTATAAGAGTGGAGAATCTTCCAATTAAGATTTTGTTGTTGAATAATCAACATTTGGGTATGGTTGTTCAGTGGGAGGATAGATTTTACAAGTCAAATAGAGCTCATACTTATCTTGGTAACCCTTCTAGGGAGGAAGAGATTTTCCCTAACATGCTTGGATTTGCAGATGCTTGTGGAATACCGGCTGCTCGTGTGACAAAGAAGGAAGAGCTAAGAGAAGCTATTCAGAAAATGTTGGACACTCCTGGTCCTTATCTTCTTGATGTCATTGTACCTCATCAAGAACATGTCTTGCCAATGATTCCAAGTAATGGATCTTTCAAGGATGTGATCACTGAAGGTGATGGCAGAAGGAGTTACTGA 2103 0.4427 MHRKMNAVNPNPILILKTRPLNIHIYYYTFKLTRTLCVHSTMAAAAATTTTTTPSRSPLHSSSSSHSTFPKRNTTLTFPLSPIYIKPIHSRPFTIPTSCSAAPPSTTTTTTTSTEPHISRFSPTEPRKGSDILVEALERQGVTNVFAYPGGASMEIHQALTRSKTIRNILPRHEQGGVFAAEGYARSSGLPGVCIATSGPGATNLVSGLADALMDSVPLIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLILDVDDIPRVVQEAFFIATSGRPGPVLIDVPKDVQQQLAVPNWGEPIKLTGYLSRLPKIPNEAQLEQVLRLLLESKKPVLYVGGGCLNSSQELNRFVELTGIPVASTLMGLGSYPIDGEHSLSMLGMHGTVYANYAVDNSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHLSICADMKVALEGLNRVLESKGIKGKLDFESWRNELNAQKLKFPLGFKTFEDAISPQYAIKVLDELTNGEAIVSTGVGQHQMWAAQFYKYKRPRQWLTSAGLGAMGFGLPAAIGAAVANPDAIVVDIDGDGSFMMNVQELATIRVENLPIKILLLNNQHLGMVVQWEDRFYKSNRAHTYLGNPSREEEIFPNMLGFADACGIPAARVTKKEELREAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGRRSY* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3327 700 PANTHER ACETOLACTATE SYNTHASE 100 699 - -
Tpr3g3327 700 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 100 699 IPR045229 -
Tpr3g3327 700 MobiDBLite consensus disorder prediction 100 126 - -
Tpr3g3327 700 Gene3D - 319 483 - -
Tpr3g3327 700 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 491 692 IPR029061 -
Tpr3g3327 700 SUPERFAMILY DHS-like NAD/FAD-binding domain 315 482 IPR029035 -
Tpr3g3327 700 CDD TPP_AHAS 492 683 IPR039368 GO:0030976
Tpr3g3327 700 ProSitePatterns Thiamine pyrophosphate enzymes signature. 551 570 IPR000399 GO:0000287|GO:0030976
Tpr3g3327 700 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 514 669 IPR011766 GO:0003824|GO:0030976
Tpr3g3327 700 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 122 302 IPR029061 -
Tpr3g3327 700 CDD TPP_PYR_POX_like 131 286 - -
Tpr3g3327 700 Pfam Thiamine pyrophosphate enzyme, central domain 320 452 IPR012000 GO:0000287|GO:0030976
Tpr3g3327 700 MobiDBLite consensus disorder prediction 49 70 - -
Tpr3g3327 700 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 128 291 IPR012001 GO:0030976
Tpr3g3327 700 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 128 692 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Tpr3g3327 700 MobiDBLite consensus disorder prediction 100 120 - -
Tpr3g3327 700 Gene3D - 484 670 - -
Tpr3g3327 700 Gene3D - 117 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3327 Tpr-Chr3 36682061 36684647 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3327 K01652 - gmx:100782250 1054.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3327 3 36682061 36684647 Tpr3g3327 3 36682061 36684647 ECH