Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3320 ATGGAAGTTAGCAAAGTTAGATCCTTCATTTTCATGCTTCTTCTCACTTTATCAAGTTGTTTTTTTGCAACTGGACAAAACCAACAACCTATTAAAACTGTTGTTGTTTTGGTTATGGAGAACCGTTCTTTTGATCATATGTTGGGGTGGATGAAGAAAGCTATCAACCCTTTAATTGATGGTGTTAATGGAGATGAATGCAATCCAGTTTCTACTGAAAGTCCAAGAAAAGATACAATTTGTTTCAGTGATGATGCTGAGTTTGTGGATCCGGATCCAGGTCATTCATTTGAAGATGTTTTGCAACAGGTATTTGGTAATGGTTCAATTCCTTCAATGAATGGTTTTGTGGAACAAGCATTGTCTGTGTCTCAGAATCTTTCTGAGACTGTAATGAAAGGGTTTAAACCACAATCTGTTCCTGTTTATGCTGCTTTGGTTAAGGAATTTGCTGTTTTTGATAGATGGTTTTCTTCAATTCCTGGTCCAACACAACCTAATAGGCTTTTTGTGTATTCTGCAACTTCTCATGGTTCAACAAGTCATGTTAAGAGACAGTTAGCAAAAGGGTATCCTCAAAAAACAATCTTTGATTCTATGCATCAGAATGGTCTGGACTTTGGAATTTATTTTCAAAACATACCAACAACTCTTTTCTATAGGAATCTAAGGAAATTGAAATACATATCTAAATTTCATCAGTATGATTTGAAGTTCAAGAAAGATGCTAGAGATGGGAAGCTTCCACCTTTGACAGTGATTGAGCCTAGGTACTTTGACTTGGTCGGTTTGCCGGCGAATGATGACCATCCATCTCATGATGTTGCAAATGGACAAATGCTTGTTAAAGAAGTTTATGAGAGTCTAAGAGCAAGTCCACAGTGGAATGAAACTCTTTTGGTTATTACATATGATGAGCATGGTGGATTTTTTGATCATGTGAAGACTCCTTTTGTTAACATTCCTAGTCCAGATGGAAATACAGGACCTGCTCCTTATTTCTTCAAGTTTGATAGGTTAGGCGTTCGGGTGCCAACTATTATGGTCTCTCCTTGGATCAAGAAAGGGATTGTGATGAGAAGCCCCAAAGGACCAGCTCCAAACTCCGAGTTTGAGCACTCGTCAATTCCTGCCACCATAAAGAAGATGTTCAACCTTTCCTCTAACTTTTTGACTCACAGAGATGCATGGGCTGGAACATTTGAGGATGTTGTTGGCGAGTTAAGTTCACCTAGAACGGATTGTCCAATGACTTTGCCGGACGTAACACCTCTAAGGAGAACTGAAGCAAAAGAAAATGATGGTCTCTCTGAGTTTCAAAGTGAAGTAGTTCAGTTGGCAGCTGTTCTGAATGGAGATCACTTCTTGAGCAGTTTCCCGGATGAAATGAGCAAGAAGATGAGTGTGAAAGAAGCTCATGATTATGTGAAGGGAGCTGTTTCAAGATTCATAAGAGCTAGCAAAGAGGCTATCAAGTTAGGGGCAGATGAGTCTGCTATTGTAGATATGAGATCCTCACTCACTACCAGATCTTCTATTCATAATTAA 1548 0.3889 MEVSKVRSFIFMLLLTLSSCFFATGQNQQPIKTVVVLVMENRSFDHMLGWMKKAINPLIDGVNGDECNPVSTESPRKDTICFSDDAEFVDPDPGHSFEDVLQQVFGNGSIPSMNGFVEQALSVSQNLSETVMKGFKPQSVPVYAALVKEFAVFDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKRQLAKGYPQKTIFDSMHQNGLDFGIYFQNIPTTLFYRNLRKLKYISKFHQYDLKFKKDARDGKLPPLTVIEPRYFDLVGLPANDDHPSHDVANGQMLVKEVYESLRASPQWNETLLVITYDEHGGFFDHVKTPFVNIPSPDGNTGPAPYFFKFDRLGVRVPTIMVSPWIKKGIVMRSPKGPAPNSEFEHSSIPATIKKMFNLSSNFLTHRDAWAGTFEDVVGELSSPRTDCPMTLPDVTPLRRTEAKENDGLSEFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHDYVKGAVSRFIRASKEAIKLGADESAIVDMRSSLTTRSSIHN* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3320 515 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 7 515 IPR007312 GO:0016788
Tpr3g3320 515 Gene3D Alkaline Phosphatase, subunit A 260 434 IPR017850 -
Tpr3g3320 515 Gene3D Alkaline Phosphatase, subunit A 23 192 IPR017850 -
Tpr3g3320 515 Pfam Phosphoesterase family 31 386 IPR007312 GO:0016788
Tpr3g3320 515 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Tpr3g3320 515 PANTHER - 7 515 - -
Tpr3g3320 515 SUPERFAMILY Alkaline phosphatase-like 146 362 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3320 Tpr-Chr3 36630750 36633560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3320 14 510 Acyl Lipid Metabolism Gene Families AT3G48610 79.960 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3320 K01114 - gmx:100786332 939.488