Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3314 ATGGCTACAATCAACAAAATTGGCTTACAAGGGAAATGGAATCTGAGCAATGGAAAGAAGGAAAATGTGATGAACAATGGAAAGGTTTTGGGGGTGGATTTTAATTATTCTCATTATCACAATAAAAGAAGATTTTCATTGGTGATTAAAAGTTGTAATCATGGTAGTACTTATAAGAAAGTGGATACAATTAATGGAACAAAGGTGAATGGTTTACAAGTGGTAGAAGCTCCAAAAAAATTGTCAACAGATGTTGCTCTTGTTACAAATGGAAAATTTGTTGAAGGAAGGTTTGTTTTTAGACAGATTTTTGTTATTAGGTCCTATGAAATTGGTCCAGATAGAACTGCCACCATGGAGACACTCATGAATTTTCTTCAGGAAACTGCTCTAAATCATGTTACCAGCTCTGGGATAGGAGGAGATGGATTTGGAGCTACGCGCGAGATGAGCCTTAGGAAACTCATTTGGGTCGTTACTCGTATTCAGGTTCAAGTGCAAAGATATAGCAAATGGGGAGAAGAAATTGAAATCGATACTTGGGTGGATGCAGCGGGGAAGAATGGAATGCGAAGAGATTGGATAATTAGAGATCGTTGTACGAAAGAGATCATAACTAAAGCAACAAGCACATGGGTGATAATGAATAGAGAAACCAGAAGATTATCAAAGATACCTGAAGAAGTTAGAAGAGAGCTTTCTCCTTTTTACATTCATAGGATTGCTGTAGCTAGCGAAGAAAGAGATTGCGAAAAGATTGACAAACTTACTGATGACACTGCTGAGACAACACAATCTGGTTTGGCTCCAAGGTGGAATGACATGGATGTTAACCAGCATGTGAACAATGTGAAATACATTGGATGGATTTTAGAGAGTGTGCCAATAAAAGTACTAGAAGATTATAACATGACAAGCATGACATTAGAGTTTAGGCGTGAATGTACACAATCAAATATGTTGGAATCCATGACATGTCCAACAGAAAGAGTGATAGGTGAATCTGATAATAATTCAGTCAATAGAAAACCTGATCTTCAATACACACACCTTCTTCGTCTACAAGACGATAAAAGAGACGTTGTTCGAGCTAGATCTGAATGGAAGTTAAAGCAAAGTCAACAATGA 1128 0.3723 MATINKIGLQGKWNLSNGKKENVMNNGKVLGVDFNYSHYHNKRRFSLVIKSCNHGSTYKKVDTINGTKVNGLQVVEAPKKLSTDVALVTNGKFVEGRFVFRQIFVIRSYEIGPDRTATMETLMNFLQETALNHVTSSGIGGDGFGATREMSLRKLIWVVTRIQVQVQRYSKWGEEIEIDTWVDAAGKNGMRRDWIIRDRCTKEIITKATSTWVIMNRETRRLSKIPEEVRRELSPFYIHRIAVASEERDCEKIDKLTDDTAETTQSGLAPRWNDMDVNQHVNNVKYIGWILESVPIKVLEDYNMTSMTLEFRRECTQSNMLESMTCPTERVIGESDNNSVNRKPDLQYTHLLRLQDDKRDVVRARSEWKLKQSQQ* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3314 375 Pfam Acyl-ACP thioesterase 99 369 IPR002864 GO:0006633|GO:0016790
Tpr3g3314 375 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 267 368 IPR029069 -
Tpr3g3314 375 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 98 243 IPR029069 -
Tpr3g3314 375 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 37 374 IPR045023 GO:0006633|GO:0016297
Tpr3g3314 375 Gene3D Hotdog Thioesterase 91 374 - -
Tpr3g3314 375 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 37 374 - -
Tpr3g3314 375 CDD 4HBT 100 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3314 Tpr-Chr3 36547051 36549847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3314 91 371 Acyl Lipid Metabolism Gene Families AT1G08510 55.516 7.08e-108 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3314 K10781 - gmx:100814191 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3314 3 36547051 36549847 Tpr3g3314 3 36547051 36549847 ECH