Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3300 ATGGAACCGAACCGAGTCAATATTCTCATCGTAACCGTCACCGTTTTCTTACTCTTCTCCCTCGGAGTTCTTGCTTCTCTCACAGGATTTGTTGGTGGTAGTGGTGGGGCTGGTAGTGGAACGTTGTTGTCCTTGTCACTATTGTTGGGATTAGAGGGTGGAACAAACAACACACTCCTCTATACTCCTCACCGCAAACTTCTCCCTCATTCTGCTACTGATGAGAGAATCGAACCAAACCGAATATGGGGTGATAACTGCACCAAATCGGACATTGTTATCAGCCAAGCTTCCACAGCACCACTCCCAAATGGTATCCCAACATACAGAGTTGAAATATCGAACATGTGTGTAAGTGGATGCGACATCTCTGCTATTCACCTTCGTTGTGGCTGGTTTAGCTCGGCACGTCTCATCAACCCAAAACTCTTCAAGCGCCTCCGGTACAATGACTGCCTTGTCAATAATGGCAAACCAGTAATCAATGGTGGCACTGTTTCTTTTCAGTATGCTAATACCTATCTCTATCCACTCTCAGTTTCCTCTGTGGTATGTGTTTGA 561 0.4581 MEPNRVNILIVTVTVFLLFSLGVLASLTGFVGGSGGAGSGTLLSLSLLLGLEGGTNNTLLYTPHRKLLPHSATDERIEPNRIWGDNCTKSDIVISQASTAPLPNGIPTYRVEISNMCVSGCDISAIHLRCGWFSSARLINPKLFKRLRYNDCLVNNGKPVINGGTVSFQYANTYLYPLSVSSVVCV* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3300 186 PANTHER PROTEIN TAPETUM DETERMINANT 1 7 186 - -
Tpr3g3300 186 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 7 186 IPR040361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3300 Tpr-Chr3 36335712 36338883 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3300 - - mtr:MTR_3g098960 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3300 3 36335712 36338883 Tpr3g3300 3 36335712 36338883 ECH