Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3296 ATGCATCCTCCGGCGCCGGCGACGGCGAACTCAAACGGTGGAACTGCCGCTGGAAATACACTTAATCCTGCGTTGATCAGAACTTATCGCTCTTGGAAAGGCAATAACGTATTTTTTCTTCAAGGGAGGATTATATTTGGACCAGATGTGAAATCTATATTTTCAACACTGTTTCTTGTGATTGCTCCTGTTGCTGTTTTTTGTGCTTTTGTTGCTAGAAAATTGTTGGATGATTTTCCTCATCATTCTGGATATTCAATTTTGATTATAGTTATTGTTCACACAATCTTTGTTCTGATTGCCCTTGTACTGACCTCAGGAAGAGATCCTGGCATAGTGCCCCGAAATTCTTATCCTCCAGTGCCAGATGAATATGATGGAAGTGTCAGTATCAGCAGTGATCAAAATCTACCGCCACAGTTACCAAGATCTAAGGAAGTAATTATAAATGGAATAGCCGTGAAAGTAAAATATTGTGATACCTGCATGCTGTATAGACCTCCTCGCTGCTCTCATTGTTCAATATGTGACAACTGTGTGGAGCGATTTGATCATCACTGCCCATGGGTGGGTCAGTGTATTGGACTGCGAAATTATCGGTTCTACTACATGTTTGTTTTCTCTGCAACCCTTCTTTGCCTATATATTCATGGCTTTTGCTGGGTCTACATCAAGAGGATCCAAAATTCAGAAGATATATCAATTTGGAAAGCAATGATCAAAACCCCTGCTTCCATTGCACTAATAATATACAGCTTCTTTTGTGTCTGGTTTGTTGGAGGACTCACTGTTTTTCATACATATCTAATCAGCACAAACCAGTCTACTTATGAAAATTTTAGATACCGTTATGACCGACAAGTCAACCCTTATAACAAAGGGGTAGTTGAGAATTTCAAAGAAATATTCTTCTCGTCCATTCCTCCATCCAAAAACAATTTCAGGTCTAAGGTTCCAATTCCTAAAGAATCGACAGAATCATCTAGAAGAAGGGGTGTTGATACCCTTACGATGCCAGTTTATAATGACGGTGACCAGGTTGAAAAAGATTATAAAGGTGAGGAATATGGCAAGGGTAGTGAATTAAGTGATACATCTGTGGATTTAAGCAATATGCTTGACACAGAAAGTGGGCAGAGACAAGTTGCTTCCTTTCTAAGGCAGTCCTTGTGGGAAAGAAGCAGCAGAAAGTGGGAAGTAACTCCGGAAGTTCTTGACGAGATACATGAAGATGGGGAGTCAAAGCAGATCCCCGGTGATAGTAGTAAAGAGCCTGGTGACAATCTATAA 1290 0.4039 MHPPAPATANSNGGTAAGNTLNPALIRTYRSWKGNNVFFLQGRIIFGPDVKSIFSTLFLVIAPVAVFCAFVARKLLDDFPHHSGYSILIIVIVHTIFVLIALVLTSGRDPGIVPRNSYPPVPDEYDGSVSISSDQNLPPQLPRSKEVIINGIAVKVKYCDTCMLYRPPRCSHCSICDNCVERFDHHCPWVGQCIGLRNYRFYYMFVFSATLLCLYIHGFCWVYIKRIQNSEDISIWKAMIKTPASIALIIYSFFCVWFVGGLTVFHTYLISTNQSTYENFRYRYDRQVNPYNKGVVENFKEIFFSSIPPSKNNFRSKVPIPKESTESSRRRGVDTLTMPVYNDGDQVEKDYKGEEYGKGSELSDTSVDLSNMLDTESGQRQVASFLRQSLWERSSRKWEVTPEVLDEIHEDGESKQIPGDSSKEPGDNL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3296 429 PANTHER S-ACYLTRANSFERASE 19 423 - -
Tpr3g3296 429 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 19 423 - -
Tpr3g3296 429 Pfam DHHC palmitoyltransferase 157 281 IPR001594 GO:0016409
Tpr3g3296 429 MobiDBLite consensus disorder prediction 401 420 - -
Tpr3g3296 429 MobiDBLite consensus disorder prediction 401 429 - -
Tpr3g3296 429 ProSiteProfiles DHHC domain profile. 157 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3296 Tpr-Chr3 36278634 36282351 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3296 86 319 Lipid Metabolism Gene Families AT4G22750 26.744 5.98e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3296 - - mtr:MTR_3g098840 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3296 3 36278634 36282351 Tpr3g3296 3 36278634 36282351 ECH