Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3224 ATGAAGTTTCCAATTACAACTCCTGCCACGTCATCACCTTCTACTTCTTCCTCCTATACACTCAATCCTCCTCCTCCTCCATGTCTCACTCATGCTTCTCCTAATTTCAAGCGTCCTATGCTGTTACCACAAACAATCTGTGCCTCTCAAAAAAAGTCCTTCTGCTCTGGAGCCCATGTGGAGGCTTCTGTTAACTGTAATCCCGTCAAAAATTACACAACAGCCAGTTTTTCTCCACGGCGATCTGAAGCAAGATTCTTGGTTTCTAACCAATCACTCAACAAACACTCATTCTCGGTGGGAGCTTTAGTAACTCCAACAGCTCAAGATGTTTCCGATACAAGTACAACTCTTACCGGTGATGATAAGATTGGAGTGTTATTGCTAAACCTTGGAGGTCCAGAGACTCTAGAAGATGTGCAACCTTTTTTATTTAACCTTTTTGCTGACCCGGATATTATACGATTGCCAAGAATATTTAGTTTTCTTCAAAAGCCATTGGCCCAATTTGTATCTGTTCTAAGGGCCCCAAAGAGCAGAGAAGGCTATGCTTCAATTGGCGGTGGTTCTCCTCTTAGACGTATAACCGATGCACAGGCTGAAGAGTTGAAGAAATCACTTTCGGAAAAGAATGTCCCTGCTGAAGTGTATGTTGGCATGCGTTACTGGCATCCATTCACCGAGGAAGCTATTGAACAGATTAAGAAAGATGGAATTACAAAGCTGGTCGTTCTCCCACTTTATCCACAATTTTCAATATCAACCAGTGGCTCGAGCTTACGTCTACTGGAGAGTATATTCCGAGATGATGAGTATCTAGTCAACATGCAGCACACAGTATTACCTTCATGGTATCAACGTGAAGGATACATAAAGGCCATGTCAAACTTAATTGAAAAAGAGCTGAAGAGTTTCGACTACCCTAAGGAGGTTATGATATTCTTTAGTGCACATGGGGTGCCTCTTGCTTATGTGGAAGAGGCCGGTGATCCATACAAGGCAGAAATGGAGGAATGTGTGGATTTGATCATGGAAGAACTGGAGACAAGAAAGATAAGCAACGCCTTCACCCTTGCATATCAGAGTAGAGTTGGACCAGTGGAATGGTTAAAACCATATACAGACGAGACAATAGTTGAACTTGGAAAAAAGGGAGTGAAAAGTTTGCTGGCTGTTCCAATTAGCTTTGTCAGTGAACATATTGAAACACTAGAAGAAATAGATGTTGAATACAAAGAATTGGCTCTAGAATCTGGTATAGAAAAGTGGGGCCGTGTTCCTGCTCTAGGATGTGAACCCTCCTTCATTTCTGATTTGGCAGATGCTGTTATTGAAAGTCTTCCGTATGTTGGTGCCATGGCAGTTTCAAATCTCCAAGCTCGACAGCCTTTGGTTCCACTCGGAAGCGTAGAGGAGTTATTGGCAGCATACGACTCACAACATAGGGAGTTGCCATCGCCGGTGATAGTGTGGGAATGGGGTTTGACAAAAAGTGCTGAAACTTGGAATGGAAGAGTAGCTATGTTGGCTGTGCTGCTTCTTTTGTTTTTTGAAGTCACTACACCTGATAGTGTTTTTCACCAGTTGGGAATATTATCGCCCGCGCTTAGGTGA 1614 0.43 MKFPITTPATSSPSTSSSYTLNPPPPPCLTHASPNFKRPMLLPQTICASQKKSFCSGAHVEASVNCNPVKNYTTASFSPRRSEARFLVSNQSLNKHSFSVGALVTPTAQDVSDTSTTLTGDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRIFSFLQKPLAQFVSVLRAPKSREGYASIGGGSPLRRITDAQAEELKKSLSEKNVPAEVYVGMRYWHPFTEEAIEQIKKDGITKLVVLPLYPQFSISTSGSSLRLLESIFRDDEYLVNMQHTVLPSWYQREGYIKAMSNLIEKELKSFDYPKEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELETRKISNAFTLAYQSRVGPVEWLKPYTDETIVELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIEKWGRVPALGCEPSFISDLADAVIESLPYVGAMAVSNLQARQPLVPLGSVEELLAAYDSQHRELPSPVIVWEWGLTKSAETWNGRVAMLAVLLLLFFEVTTPDSVFHQLGILSPALR* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3224 537 CDD Ferrochelatase_C 292 430 IPR033644 -
Tpr3g3224 537 SUPERFAMILY Chlorophyll a-b binding protein 491 531 - -
Tpr3g3224 537 ProSitePatterns Ferrochelatase signature. 313 334 IPR019772 GO:0004325|GO:0006783
Tpr3g3224 537 PANTHER FERROCHELATASE 58 457 IPR001015 GO:0004325|GO:0006783
Tpr3g3224 537 SUPERFAMILY Chelatase 122 453 - -
Tpr3g3224 537 Pfam Ferrochelatase 123 446 IPR001015 GO:0004325|GO:0006783
Tpr3g3224 537 MobiDBLite consensus disorder prediction 1 23 - -
Tpr3g3224 537 MobiDBLite consensus disorder prediction 1 18 - -
Tpr3g3224 537 CDD Ferrochelatase_N 124 286 IPR033659 -
Tpr3g3224 537 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 58 457 - -
Tpr3g3224 537 Gene3D - 285 428 - -
Tpr3g3224 537 Gene3D - 123 446 - -
Tpr3g3224 537 TIGRFAM hemH: ferrochelatase 122 447 IPR001015 GO:0004325|GO:0006783
Tpr3g3224 537 Hamap Coproporphyrin III ferrochelatase [cpfC]. 122 447 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3224 Tpr-Chr3 35410210 35415703 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3224 K01772 - gmx:100785669 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3224 3 35410210 35415703 Tpr3g3224 3 35410210 35415703 ECH
Tpr3g0757 3 7236748 7242415 Tpr3g3224 3 35410210 35415703 PCT