Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3222 ATGCAATCCTTTCGCAACGTTCAAAACAAAGATGAATCGGGTGCATCATCGGTGAACCATGCAGCCACCCCATTTCGCTCCCTCTCAACATGCAACCGGACTAGTCGCACCTCCCCATCAACAAACCGACCGGTTCAACGATCCGCCTCTGCGAGATTGGCTCGTCAAAACACCTCACGCGAGGTGATGCTTAATGATATCGTTGGTAATGGAATATCCGGTATTCTACATAAGTGGGTTAACTACGGTCGAGGGTGGCGGCCTCGTTGGTTTGTCCTCCACGACGGTGTTTTATCCTATTACAAAATTCATGGTCCTGATAAACTCATTCTCAACCGTGATGTTGAAAATCAATCTAAAGTTATTGGCGATGAGTCCCTTCGCCGTATCGCTAGCAACCGCAATTGTCCCTCCCGCAACCGCAAACCCGTCAGTGAAATCCACCTCACGGTGTGTTCTGTGCGTGAGAACAAAACAGATGAAAAGAGGTTTTGTATATGCACTGGGACAAAGAAGAGAATACATTTAAGAGCAGAGAGTAAAGATGACAGAGCAAAGTGGATGGAGGCAATGATGGCAGTGAAAAGCATGTATCCTAGATTACCAACAACTACAGATGTTTTGTCTCCTTCAGCTTCTGTAGTGATTTCCACTGACAAGTTAAGGCAAAGGCTTGTGCAAGAGGGTGTGAATGAAGTTTCAATTCGTGAATGTGAAGATATAATGAGAGCAGAGTTATTTCAGTTACATACTTATATTGTTGCTCTTAAGCAGAAACAATTGTTACTCACTGACACACTTCGTAATTTAGAGACAGAGAAGGTTGACTTGGAGAACACGCTTGTTGAAGACCAAAAACAATACAAGGATGAAGGAGATTCCTATCTATCAACACAAGAAGAAAGTGATGGAAGTGGAAGTGAATATTCAGATGAGCAAAATAGGAATGATCAATCCGACGACGATGAGAGTGATGCATTCTTCGATACATACGAAATTCTTTCATCTGATCATTTGAGATCCAACCAAGAAGAATCTGAAAGTGAAGAGACATCTAATCCAACAAGAAAATGTGATTCAAAATCTCCTAATGAATTTAACTATCCTTATATCAATAGAAGAAAGAAGTTGCCTGATCCTAGTGAGAAAGAAACTGGAATTAGTTTATGGTCAATAATAAAAGACAATATTGGAAAAGATCTTACAAAAGTTTGTCTTCCAGTTTATTTTAATGAACCAATCTCATCATTGCAAAAATGTTTTGAAGATTTGGAATATTCTCATCTTCTAGATCAAGCATATGAATGTGGTAAAAGGGGTGACAATCTAATGAGGATACTCTATCTGGCTGCATTTGCAGTTTCAGGGTATGCTAACACTAGTGGTAGAAGTTGCAAACCATTTAATCCATTATTGGGTGAGACATATGAGGCAGATTATCCAGACAAAGGTCTACGTTTTATCTCTGAAAAGGTCAGTCACCATCCTATGGTTGTAGCATGTCATTGTGAGGGTCGTGGTTGGAAATTTTGGGGTGATAGTATTTTAAAAAGTAAATTTTGGGGTCGTTCAATTCAGCTTGATCCTATTGGTATTTTGACTGTGGAGTTTGATGATGGAGAAGTCTTCTATTGGAGTAAGGTGACAACATCCATTTACAATCTCATTTTAGGAAAACTCTATTGTGACCATTATGGTACAATGAGAATAGAGGGAAATCGTGAGTATTCATGTAAGGTCAAATTCAAGGAGCAATCGATTATTGATAGAAATCCTCATCAGGTTCATGGTACAGTGGAAGATAAGAAGGGGAAAACAGCAGCTACTCTATTTGGAAAATGGGATGATAGCTTGCATTATATAATTGGAGGACATTCTGGAAAAGGGAAAGGGTCTAATAAGTCATCAAAACCACATATGTTGTGGAAGAAAAACCAATTACCAGAGCAACAAACAAGATATAACCTTACAGAATTTGCTCTTACACTAAATGAACTCACCTCTGGTCTAAAGGAGAAGTTGCCACCAACTGATTCAAGGCTAAGGCCTGACCAAAGATGTTTGGAGAATGGACAATATGAAAAGGCCAATTCTGAAAAATTGCGGTTGGAACAAAGACAACGACAGGCACGAAAGATGCAAGAGAAAGGTTGGAAACCAAAGTGGTTTGCCAAGGAAAAAGGCAGTAATAGTTATCGTTATATTGGTGGATATTGGGAGACTAGAGAAAAGGGGAATTGGGGATCTTGTCCTGACATTTTTGGCCAATTCTCAAATGATATTGATCAAGAATCTAAATTAAGCTCATAA 2310 0.3944 MQSFRNVQNKDESGASSVNHAATPFRSLSTCNRTSRTSPSTNRPVQRSASARLARQNTSREVMLNDIVGNGISGILHKWVNYGRGWRPRWFVLHDGVLSYYKIHGPDKLILNRDVENQSKVIGDESLRRIASNRNCPSRNRKPVSEIHLTVCSVRENKTDEKRFCICTGTKKRIHLRAESKDDRAKWMEAMMAVKSMYPRLPTTTDVLSPSASVVISTDKLRQRLVQEGVNEVSIRECEDIMRAELFQLHTYIVALKQKQLLLTDTLRNLETEKVDLENTLVEDQKQYKDEGDSYLSTQEESDGSGSEYSDEQNRNDQSDDDESDAFFDTYEILSSDHLRSNQEESESEETSNPTRKCDSKSPNEFNYPYINRRKKLPDPSEKETGISLWSIIKDNIGKDLTKVCLPVYFNEPISSLQKCFEDLEYSHLLDQAYECGKRGDNLMRILYLAAFAVSGYANTSGRSCKPFNPLLGETYEADYPDKGLRFISEKVSHHPMVVACHCEGRGWKFWGDSILKSKFWGRSIQLDPIGILTVEFDDGEVFYWSKVTTSIYNLILGKLYCDHYGTMRIEGNREYSCKVKFKEQSIIDRNPHQVHGTVEDKKGKTAATLFGKWDDSLHYIIGGHSGKGKGSNKSSKPHMLWKKNQLPEQQTRYNLTEFALTLNELTSGLKEKLPPTDSRLRPDQRCLENGQYEKANSEKLRLEQRQRQARKMQEKGWKPKWFAKEKGSNSYRYIGGYWETREKGNWGSCPDIFGQFSNDIDQESKLSS* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3222 769 Pfam Oxysterol-binding protein 388 743 IPR000648 GO:0008289
Tpr3g3222 769 SUPERFAMILY PH domain-like 72 210 - -
Tpr3g3222 769 ProSiteProfiles PH domain profile. 69 196 IPR001849 -
Tpr3g3222 769 Pfam PH domain 72 193 IPR001849 -
Tpr3g3222 769 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 13 759 - -
Tpr3g3222 769 Coils Coil 267 287 - -
Tpr3g3222 769 SUPERFAMILY Oxysterol-binding protein-like 383 760 IPR037239 -
Tpr3g3222 769 Gene3D - 70 198 IPR011993 -
Tpr3g3222 769 Coils Coil 693 716 - -
Tpr3g3222 769 MobiDBLite consensus disorder prediction 338 364 - -
Tpr3g3222 769 MobiDBLite consensus disorder prediction 1 56 - -
Tpr3g3222 769 SMART PH_update 70 198 IPR001849 -
Tpr3g3222 769 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 13 759 IPR000648 GO:0008289
Tpr3g3222 769 MobiDBLite consensus disorder prediction 338 356 - -
Tpr3g3222 769 MobiDBLite consensus disorder prediction 284 322 - -
Tpr3g3222 769 Gene3D - 474 657 - -
Tpr3g3222 769 Gene3D - 685 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3222 Tpr-Chr3 35394909 35400231 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3222 K20456 - gmx:100781218 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3222 3 35394909 35400231 Tpr3g3222 3 35394909 35400231 ECH