Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3201 ATGGAAAAATGGGTGCACATGTCTTTGGTTATGCTATTGGTAATATCAATGGATTTTGGAGTTAAAGGTGATGATGCAGAAGAGGTTACATATGATGGAAGGTCTCTTATCATTAATGGCCAAAGAAATATTCTCTTTTCTGGTTCTATTCATTACCCCCGCAGCACCCCTCAGATGTGGCCAGATTTGATAGCGAAAGCAAAACAAGGAGGATTGGATGTTATACAAACTTATGTCTTTTGGAATTTACATGAACCCCAACAAGGCAAGTATGATTTCAGTGGTAGATACGACTTAGTGAGATTCATAAAGGAAATCCAAGCTCAAGGACTCTATGTTTGCCTAAGGATTGGACCTTTCATCGAAAGTGAATGGACTTACGGGGGATTCCCATTTTGGCTACATGATGTCCCTGGCATTGTCTACCGAACTGACAATGAACCATTCAAGTTCTACATGCAAAATTTTACGACAAAAGTTGTTAACATGATGAAAGAAGAGGGTTTATATGCTTCACAAGGAGGCCCAATTATATTATCACAGATTGAGAATGAATATCAAAACGTCCAGAGGGCATTTGGCACAGCAGGATCCCAATATGTTGAATGGGCTGCAAAAATGGCAGTGGGCCTTAACACTGGTGTACCCTGGGTTATGTGCAAGCAAACTGATGCTCCTGATCCTGTGATAAATACATGCAACGGTATGAGATGTGGAGAAACTTTTACTGGACCAAACTCCCCTAATAAGCCTGCCATGTGGACAGAAAATTGGACATCTTTCTATCAAGTATATGGTGGGTTACCATATATACGGTCTGCTGAAGACATAGCATTTCATGTCACACTTTTTATTGCAAAAAATTATGGAAGCTTTGTCAATTACTATATGTATCATGGTGGAACAAACTTTGGTAGAACAGGCTCTGCTTATACTATAACAGCTTATTATGATCAAGCACCACTTGATGAATATGGTTTGTTCAGACAACCTAAGTGGGGACATCTCAAGGAATTGCATGCTACAATCAAGTCTTGTTCCACCACTTTATTACAAGGAGTACAAAGGAACATTTCTTTAGGTCAACTTCAGGAGGGTTATGTTTTCGAAGAAGAAAATGGAGAATGTGTTGCATTCCTTATAAATAATGATCAAAGGAGCAATGTTACTGTCCAATTCCAAAATAGCTCATATGAATTGCTTCCCAAGTCAATAAGCATATTACCAGATTGTCAAAATGTTGCTTTCAATACTGCACATTTAAATACAACTAGCAACAGAAGGATAATAACTTCAAGACAAAACTTCAGTTCAGTTGATGATTGGAAACAGTTTCAAGATATCATTCCAAATTTTGATGACACTTCACTAAGATCAAATTCATTACTTGAACAAATGAATACAACTAAAGACATTTCTGATTACCTTTGGTATACTCTTAGATTTGAAAATAATTTATCTTGCAATGATCCAGTACTTCGCGTTCAATCTGCCGCTCATGTTGCACATGCTTTTGTGAACAACACATACATTGGAGGGTTACATGGAAATCATGATGTGAAGTCATTTACATTAGAGCTCCCAACTACATTAACAAATGGAACAAACAACATTTCTATTCTCAGCGTTATGGTCGGACTTCCGGATTCAGGGGCATTTCTTGAAAGAAGATTTGCTGGTTTAAATAATGTGGAACTTCAGTGCAGTGAAGAAGAGACTCTTAATTTGAACAATTCTACATGGGGATATCAGGTTGGATTACTTGGAGAACAATTAGAAGTATATAAAGATCAAAATAGTAGTGACATTAAATGGACTCAACTTGGGGATATCTTGATTGATGAAACTACTCTCACTTGGTACAAGGCTACATTTGGCACACCTGAGGGAGAGGACCCTGTTGCATTGGACCTTAGCTCAATGGGGAAAGGTGAGGCATGGGTAAATGGACAAAGCATTGGTCGATATTGGATTTTGTTTCATAACTCCAAAGGCATTCCTTCACAATCATTGTATCATGTTCCTCGTTCTTTCCTTAAAGACAGTGAAAACATTTTGGTTTTGTTGGAGGAAGGTGGTGGGAACCCTCTTGGTATCTCCTTGAATACTGTCTCAGTCACAGATTTGCAAGATAACTTTTCTAAATTGCCATTCCCCACCTTTGTCTAG 2169 0.3813 MEKWVHMSLVMLLVISMDFGVKGDDAEEVTYDGRSLIINGQRNILFSGSIHYPRSTPQMWPDLIAKAKQGGLDVIQTYVFWNLHEPQQGKYDFSGRYDLVRFIKEIQAQGLYVCLRIGPFIESEWTYGGFPFWLHDVPGIVYRTDNEPFKFYMQNFTTKVVNMMKEEGLYASQGGPIILSQIENEYQNVQRAFGTAGSQYVEWAAKMAVGLNTGVPWVMCKQTDAPDPVINTCNGMRCGETFTGPNSPNKPAMWTENWTSFYQVYGGLPYIRSAEDIAFHVTLFIAKNYGSFVNYYMYHGGTNFGRTGSAYTITAYYDQAPLDEYGLFRQPKWGHLKELHATIKSCSTTLLQGVQRNISLGQLQEGYVFEEENGECVAFLINNDQRSNVTVQFQNSSYELLPKSISILPDCQNVAFNTAHLNTTSNRRIITSRQNFSSVDDWKQFQDIIPNFDDTSLRSNSLLEQMNTTKDISDYLWYTLRFENNLSCNDPVLRVQSAAHVAHAFVNNTYIGGLHGNHDVKSFTLELPTTLTNGTNNISILSVMVGLPDSGAFLERRFAGLNNVELQCSEEETLNLNNSTWGYQVGLLGEQLEVYKDQNSSDIKWTQLGDILIDETTLTWYKATFGTPEGEDPVALDLSSMGKGEAWVNGQSIGRYWILFHNSKGIPSQSLYHVPRSFLKDSENILVLLEEGGGNPLGISLNTVSVTDLQDNFSKLPFPTFV* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3201 722 Gene3D - 581 713 - -
Tpr3g3201 722 PANTHER BETA-GALACTOSIDASE 6 26 715 - -
Tpr3g3201 722 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Tpr3g3201 722 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Tpr3g3201 722 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Tpr3g3201 722 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Tpr3g3201 722 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Tpr3g3201 722 PRINTS Glycosyl hydrolase family 35 signature 253 268 IPR001944 GO:0004553|GO:0005975
Tpr3g3201 722 PRINTS Glycosyl hydrolase family 35 signature 291 306 IPR001944 GO:0004553|GO:0005975
Tpr3g3201 722 PRINTS Glycosyl hydrolase family 35 signature 310 326 IPR001944 GO:0004553|GO:0005975
Tpr3g3201 722 PRINTS Glycosyl hydrolase family 35 signature 616 630 IPR001944 GO:0004553|GO:0005975
Tpr3g3201 722 PRINTS Glycosyl hydrolase family 35 signature 643 659 IPR001944 GO:0004553|GO:0005975
Tpr3g3201 722 Gene3D Glycosidases 26 347 - -
Tpr3g3201 722 Gene3D - 442 578 - -
Tpr3g3201 722 Pfam Glycosyl hydrolases family 35 35 342 IPR031330 -
Tpr3g3201 722 PANTHER BETA-GALACTOSIDASE RELATED 26 715 IPR001944 GO:0004553|GO:0005975
Tpr3g3201 722 Pfam Beta-sandwich domain in beta galactosidase 350 420 IPR041392 -
Tpr3g3201 722 SUPERFAMILY Galactose-binding domain-like 405 561 IPR008979 -
Tpr3g3201 722 Pfam Beta-galactosidase jelly roll domain 614 689 IPR025300 -
Tpr3g3201 722 SUPERFAMILY (Trans)glycosidases 28 346 IPR017853 -
Tpr3g3201 722 SUPERFAMILY Galactose-binding domain-like 580 706 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3201 Tpr-Chr3 35182088 35189709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3201 7 707 Glycoside Hydrolase AT5G63800 62.910 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3201 - - gmx:100818637 1279.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3201 3 35182088 35189709 Tpr3g3201 3 35182088 35189709 ECH