Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3193 ATGGTAGAAAACAATTCCAGAGCCAACCTTAGTTACCGTGGAGATATTGTTGGCATTGAGGAGGCCGCCATAGATGGCACACCTGACCCCAAATTCTATGACGACGATGGCCGTGTTAAACGAACAGGAACCGTTTGGACTACATGCTCCCACATAATAACAGCTGTGATAGGATCTGGGGTGCTCTCTTTAGCCTGGTCCCTAGCTCAGATGGGTTGGATTGCTGGTCCTGCAGCCATGATCTTTTTCAGTATCATCACTCTGTATACTTCATCATTTCTCGCTGATTGTTATCGTTGTGGCGACACCGAATTTGGAAAGAGAAACTATACTTTCATGGATGCAGTTCGCAACATTCTTGGCGGGTCCAGTGTTAAGATTTGTGGAATAGTTCAGTACTTGAATCTTTTTGGAAGTGCAATAGGATACAATATTGCTGCTGCCATGAGCCTGATGGAAATCAGAAAGTCTTACTGTGTCCATTCCTCTGATGGAACAGACCCATGTCACATTTCCGGCAACCCATACATGATAGCTTTTGGCGTGGCACAGCTTTTCTTATCTCAAATTCCTGATTTTCATGACATGTGGTGGCTCTCGGTAGTTGCTGCAGTCATGTCTTTCTTCTATTCCATAATTGCTCTTGCTCTTGGAATTTCCAAAGTTGCAGAAACGGGTACTGTCATGGGTAGCCTCACAGGAATAAGCATCGGAACAGTGACCCCGGCCCAAAAAGTATGGGGGGTTTTCCAAGGTCTTGGAAACATTGCCTTTGCCTATTCGTATTCTTTTGTTCTCCTGGAAATTCAGGACACCATCAAATCTCCACCATCAGAAGGAAAAGCAATGAAGAAAGCTGCAAAGCTAAGTATTGCAATAACCACAACATTTTATATGCTCTGTGGCTGCATGGGTTATGCTGCTTTTGGAGACAATGCACCTGGAAACCTGCTTGCCGGATTTGGTGTCTCGAAAGCTTACTGGGTTGTAGATCTTGCTAATGCTGCTATCGTTATTCATCTTTTTGGAGCATACCAAGTTTATGCCCAACCACTCTTTGCCTTTGTCGAGAAAGAGGCAGCAAAGAAATGGCCCAAAATTGACAAAGAATTCAAAGTTAAAATTCCTGGTTTGCCAGTTTACAATCAAAACATATTTATGTTAGTTTGGAGGACAGTGTTTGTTATCATCAGCACTCTCATAGCAATGTTGATTCCATTTTTCAACGACGTATTAGGAGTGATCGGAGCATTGGGATTTTGGCCTTTAACTGTTTACTTTCCTGTGGAGATGTATATCATACAGATGAAGATCCCAAAATGGAGTAGTAAATGGATTTGTCTGGAAATAATGAGTACTATCTGCCTCATAGTATCCATTGTAGCTGGTCTCGGCTCATTGGTTGGTGTCTGGATTGACCTGCAGAAATACAAACCATTCAGCTTAGAGAATTAA 1455 0.4268 MVENNSRANLSYRGDIVGIEEAAIDGTPDPKFYDDDGRVKRTGTVWTTCSHIITAVIGSGVLSLAWSLAQMGWIAGPAAMIFFSIITLYTSSFLADCYRCGDTEFGKRNYTFMDAVRNILGGSSVKICGIVQYLNLFGSAIGYNIAAAMSLMEIRKSYCVHSSDGTDPCHISGNPYMIAFGVAQLFLSQIPDFHDMWWLSVVAAVMSFFYSIIALALGISKVAETGTVMGSLTGISIGTVTPAQKVWGVFQGLGNIAFAYSYSFVLLEIQDTIKSPPSEGKAMKKAAKLSIAITTTFYMLCGCMGYAAFGDNAPGNLLAGFGVSKAYWVVDLANAAIVIHLFGAYQVYAQPLFAFVEKEAAKKWPKIDKEFKVKIPGLPVYNQNIFMLVWRTVFVIISTLIAMLIPFFNDVLGVIGALGFWPLTVYFPVEMYIIQMKIPKWSSKWICLEIMSTICLIVSIVAGLGSLVGVWIDLQKYKPFSLEN* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3193 484 Pfam Transmembrane amino acid transporter protein 41 470 IPR013057 -
Tpr3g3193 484 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 5 478 - -
Tpr3g3193 484 PANTHER OS05G0424000 PROTEIN-RELATED 5 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3193 Tpr-Chr3 35116033 35121858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3193 28 480 Organic Solute Cotransporters AT5G09220 65.795 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3193 K24917 - gmx:100817699 770