Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3192 ATGGAGCAAGATGAACAACACTCTATAGAAGAAGCTGCTCATTCACACACTCACACCAAATTGTACGATGATGATGACCGTATCAAAAGAACAGGAACGGTTTGGACTGCGAGTTCGCACATAATAACAGCAGTTGTAGGATCAGGGGTGTTGTCGTTAGCATGGGCTATAGCTCAGCTGGGTTGGATAGTTGGTCCTTCAGTTATGCTTTTCTTCAGTCTCATTACTTGGTATACTTCATCACTTCTAGCTGAATGTTATCGAATTGGCGATCCTCATTCCGGGAAAAGAAACTATACTTTCGTCGAAGCTGTTCACACTATTCTCGGTGGTTTCAATGACACCCTATGTGGGATAGTTCAGTACACGAATCTTTACGCAACTGCAATAGGATACACAATTGCCGGTGCTATTAGCATGATGGCAATAAAAAGGTCTGAATGTTTACATTCCTCAGGAGGAAAAGACCAATGTCACATTTCAAGCAACCCATACATGATCGCTTTTGGAGTAATCCAAATTTTCTTTTCTCAAATTCCAGATTTTCATAAAATGTGGTGGCTCTCAATAATTGCAGCCATCATGTCTTTCACCTATTCGTTTATCGGCCTTGGTCTGGCAATTGCCAAAGTTGCAGAAAATGGTTCCTTCAAGGGTAGTCTCACAGGAGTAAGCATTGGAACTGTGACAAAAGCCCAAAAAATTTGGGGAACTTTCCAAGCTCTTGGTAACATAGCCTTTGCATATTCATATTCTCAAATCCTCATTGAAATTCAGGACACCATAAAAACTCCACCATCTGAAGTAAAAACAATGAACCAAGCCACACGGATAAGTATAGGTGTGACGACCACATTTTATTTGCTTTGTGGCTGCATGGGTTATGCAGCATTTGGAGACACAGCACCGGGGAACATACTTACTGGAATTTATAAACCATATTGGCTCATTGATATTGCTAATGCAGCTATAGTAATTCACATTGTCGGAGCATACCAAGTATATGCGCAACCTGTCTTTGCCTTCGTTGAGAAAAGGGTGATAAAAAAATGGCCTAAAATAAACAAAGAATACCAAATCTCAATTCCTGGTTTTCATCCTTACAATCTAAATCTATTTAGATTAATTTGGAGGACTATTTTTGTGATCACAACAACTTTTATATCAATGTTGATTCCTTTCTTCAACGATGTTTTGGGATTAATTGGAGCAGTTGGGTTTTGGCCTTTAACAGTTTATTTTCCAGTGGAGATGTATATCAGACAAAGGAAGGTGCCAACATGGAGTTATAAATGGATTTGTATGCAAACATTAAGTGTTGTATGTCTTATTGTATCAATTGTGGCTGGTGTTGGCTCAGTGGCAAGTATTGTGCTTGATCTAAAGAAATACAAACCATTCATGGTTAATTATTGA 1416 0.3891 MEQDEQHSIEEAAHSHTHTKLYDDDDRIKRTGTVWTASSHIITAVVGSGVLSLAWAIAQLGWIVGPSVMLFFSLITWYTSSLLAECYRIGDPHSGKRNYTFVEAVHTILGGFNDTLCGIVQYTNLYATAIGYTIAGAISMMAIKRSECLHSSGGKDQCHISSNPYMIAFGVIQIFFSQIPDFHKMWWLSIIAAIMSFTYSFIGLGLAIAKVAENGSFKGSLTGVSIGTVTKAQKIWGTFQALGNIAFAYSYSQILIEIQDTIKTPPSEVKTMNQATRISIGVTTTFYLLCGCMGYAAFGDTAPGNILTGIYKPYWLIDIANAAIVIHIVGAYQVYAQPVFAFVEKRVIKKWPKINKEYQISIPGFHPYNLNLFRLIWRTIFVITTTFISMLIPFFNDVLGLIGAVGFWPLTVYFPVEMYIRQRKVPTWSYKWICMQTLSVVCLIVSIVAGVGSVASIVLDLKKYKPFMVNY* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3192 471 Pfam Transmembrane amino acid transporter protein 30 458 IPR013057 -
Tpr3g3192 471 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 6 465 - -
Tpr3g3192 471 PANTHER OS05G0424000 PROTEIN-RELATED 6 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3192 Tpr-Chr3 35111754 35115387 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3192 20 471 Organic Solute Cotransporters AT5G09220 68.996 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3192 K24917 - gmx:100816507 711.449