Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3188 ATGGGGACTGAAACCGGTTTTGTTCCGGAAATGACAGAAAACATAGCTATGGATTCAGCAGAGAAGAGACTCAATGAGCTTGGTTACAAGCAAGAACTAAGAAGAGAAATGACTATGTTCAAAACTCTGGCAATATCATTTTCAACAATGACTCTTTTCACTGGAATCACACCTTTGTATGGTTCTAGCCTTCAATATGCCGGCCCGGCAAGTCTTGTATGGGGATGGGTGGTTGTTTGTTTTTTCACTTGGTTTGTTGGGATTGCAATGGCTGAGATATGTTCATCCTTTCCGACAACTGGTTCGCTGTACTTTTGGGCTGCTCATTTAGCTGGTCCAAAATGGGGGCCATTTTCTTCATGGTGCTGTGCTTGGCTTGAGACCATAGGTCTCATTGCTGGGGTTGGGACTCAGGCATATGCAGGAGCACAAACGTTGCAAAGTATAATCCTAATATCAACAGGAACAAATAAAGGTGGAGGGTACTTTGCCCCAAAATGGCTTTTCTTATGCATTTACATTGGCCTTACTATTATATGGGCAGCATTGAACACGTTTGCATTGGAAGTCATTGCCTTTATCGATATAATTTCAATATGGTGGCAGGTCATTGGTGGAGCAGTGATAGTGATACTGTTACCTTTGGTGGCACTGACTACACAATCTGCTTCATATGTATTCACAAACTTTGAATTAGCCCCGGCTACAACAGGAATATCAAGCAAACCATATGCAGTGATTCTATCATTTCTTGTGAGCCAGTATTCCCTCTATGGATATGATGCTGCAGCACATCTAACTGAAGAAACTAAAGGTGCAGACAAGAATGGACCCAAAGCAATACTAGGAAGTATTGGCATCATTTCAGTATTTGGTTGGGCTTACATCTTGGCACTTACATTCAGCATTCAGGATTTCGCTTACCTTTATGATCCAAACAATGAGACTGCTGGTGCATTTGTGCCAGCACAAATATTATATGATGCATTCCATGGAAGATATCACAATTCTGCTGGAGCAATTGTTCTACTGTTTATCATTTGGGGTTCATTCTTCTTTGGTGGACTTTCAATCACTACAAGTGCTGCTAGAGTGGTTTATGCCCTATCAAGAGATAATGGAGTTCCATTTTCATTCTTATGGCGAAAACTGCATCCAAAGCACAAGGTTCCTACAAATGCAGTATGGCTTTGTGCAGGAATCTGCATTCTTCTTGGTCTACCGATTTTGAAGGTCAATGTAGTCTTTACTGCAATAACTTCCATAGCAACAATTGGATGGGTTGGTGGTTATGCAGTTCCAATCTTCGCAAGAATGGTGATGCCTGAGAAGAACTTCAAGCCAGGACCATTTTATTTGGGCAAGGCGAGTAGACCGATATGTTTGGTAGCTTTTCTATGGATTTGTTACACATGTTCTGTATTCCTTTTGCCAACTCTTTATCCAATAACTTGGAATACTTTCAATTATGCACCAGTTGCTCTTGGGGTAGGTTTAGGTTTAATCATGCTTTGGTGGGTATTAGATGCAAGAAAATGGTTCACGGGACCAGTTAGGAATATTGATGATCAAAATGGCAAGGTGTAA 1587 0.4115 MGTETGFVPEMTENIAMDSAEKRLNELGYKQELRREMTMFKTLAISFSTMTLFTGITPLYGSSLQYAGPASLVWGWVVVCFFTWFVGIAMAEICSSFPTTGSLYFWAAHLAGPKWGPFSSWCCAWLETIGLIAGVGTQAYAGAQTLQSIILISTGTNKGGGYFAPKWLFLCIYIGLTIIWAALNTFALEVIAFIDIISIWWQVIGGAVIVILLPLVALTTQSASYVFTNFELAPATTGISSKPYAVILSFLVSQYSLYGYDAAAHLTEETKGADKNGPKAILGSIGIISVFGWAYILALTFSIQDFAYLYDPNNETAGAFVPAQILYDAFHGRYHNSAGAIVLLFIIWGSFFFGGLSITTSAARVVYALSRDNGVPFSFLWRKLHPKHKVPTNAVWLCAGICILLGLPILKVNVVFTAITSIATIGWVGGYAVPIFARMVMPEKNFKPGPFYLGKASRPICLVAFLWICYTCSVFLLPTLYPITWNTFNYAPVALGVGLGLIMLWWVLDARKWFTGPVRNIDDQNGKV* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3188 528 Pfam Amino acid permease 39 497 IPR002293 GO:0016020|GO:0022857|GO:0055085
Tpr3g3188 528 ProSitePatterns Amino acid permeases signature. 67 98 IPR004840 GO:0006865|GO:0016021|GO:0055085
Tpr3g3188 528 PANTHER AMINO-ACID PERMEASE BAT1 11 528 - -
Tpr3g3188 528 PIRSF AA_transporter 17 527 - -
Tpr3g3188 528 Gene3D Amino acid/polyamine transporter I 32 515 - -
Tpr3g3188 528 PANTHER OSJNBB0086G13.12 PROTEIN 11 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3188 Tpr-Chr3 35080169 35084550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3188 86 521 Organic Solute Cotransporters AT2G01170 42.890 4.88e-109 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3188 - - gmx:100815443 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3188 3 35080169 35084550 Tpr3g3188 3 35080169 35084550 ECH