Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3180 ATGGCTGGACGCGGCATCACCGTCCTCAACGTGGCGGAGAAGCCGTCGGTGGCGAAATCGGTATCCAACATACTTTCAAGGAACCAAGGCCTTCGAGTTAGGGATGGTCGTTCTCGTTACAACAGGATCTTCGAGTTCAATTACACCATTCGCGGCCAACCTTGTAACATGCTCTTCACCTCCGTCATCGGTCATCTCATGGAACTTGAATTCGATGATCGTTACCGGAAATGGCACTCTTGTGATCCCGCCGATCTCTTCCAAGCTCCTGTTCATAAATCTGTTCCCGAGGATAAGAAAGATATTAAGAGGACATTAGAGGAGGAAGCTAGGCGGTGTCAGTGGCTTGTGTTGTGGCTTGATTGTGATAGGGAAGGCGAGAATATTGCGTTTGAAGTTGTTGATGTTTGTACTGCGGCAAATCCTCGTCTTACTATTAAGAGAGCTCGATTTTCTGCATTGATTGACAGGGAAATCCATCAGGCTGTGCAGAATCTTGTTGAGCCTAATAAGTGGTTTGCTGATGCAGTGGATGCTAGGCAGGAAATAGACCTTCGTATAGGCGCTTCGTTCACCAGATTTCAGACTATGTTAATGAAAGATGCTTTTGTCATAGATACTGTTACAGATGGCAGAAATATTGTCTTGAGTTATGGCCCTTGCCAGTTCCCTACGCTTGGATTTGTTGTGGAAAGATATTGGGAGATACAAGCACATGAACCAGAAAACTTTTGGTCAATTAATTGTTCTCATAGATCAGAGGAAGGCGTTGCTACTTTCAACTGGGGGCGGGGGCATTTGTTTGATTATACATATGCTGTCATAATATATGAGATGTGCATTGAGGAACCAACTGCAACTGTGACAAATGTTAGACAACAGGAGAAGCTGAAGTATCCTCCCCATCCTCTGAGTACTATTGAGCTTGAGAAACGGGCTTCACGATACTTCCGGATGAGCTCTGAGCACACAATGAAGGTGGCAGAAGAACTTTACCAAGGTGGTTTCATCAGTTATCCTCGAACAGAAACTGATAACTTTTCTTCAAGGACTGATTTGCATGCAATTGTACAAGAACAACAAGGGCATCCTGAATGGGGAACATATGCACAGCGGTTGTTGGACCCTGGGGCGGGACTTTGGAGAAACCCTAGAGGTGGTGGACACGATGACAAGGCCCATCCACCCATCCACCCCACTAAATTCTCTGCCGGAGAATCAGGATGGAGCCAAGACCACCGTAGACTGTATGAATTGGTTGTTCGCCACTTCCTGGCATGTGTCTCAAAGCCGGCTGTTGGAGCCGAAACCACAGTGGAAATTGATATTGCTGGTGAACTATTTTCTGCATGTGGGAGGGTGATTCTAGAGAAAAACTACTTGGATGTCTATCCCTATGAATCTTGGGGTGGATCAATGATTCCACCATATACTATCGATCAACAGTTCATTCCAACAACATTGACCCTTGATCCAGGAGTAACCAGACCGCCACCTCTTCTTAGTGAAGCTGATTTGCTGAGTTGTATGGACAAGGAGGGCATTGGTACGGATGCTACAATGCATGATCACATCAAGAAGCTGCTTGATCGATTTTATGCAACTAAGGATGCTAGCATGCGTTTCACACCAACTAATCTGGGTGAGGCACTTGTTATGGGATATGATGACATGGGGTATAAACTATGGAAACCATATCTTAGAGCAGTTATGGAACGCGATATGAAATCAGTCAGTGAAGGGACTAAAAGCAAAGCTGAAGTTTTGGATACTAGTTTGCAGCAGATGAAAGATTGTTTCTTAGATGCAAGATTAAATAAAGTGAAACTTTTAGAAGCCATGGCAATATTTTTCGAAAGATCAAATAGAGTTGGCAGCGAGGAGCAGAATGCAACTGGGGAAGTTGTTCGACGGTGTGGACTTTGCCAGGAATCAGATATGGTGCTAAAGAAAAACCGAGATGGCAATTTTATGGTTGGATGCTTGGGTTACCCTCAGTGTAGAAGTGTTGTCTGGCTCCCTGGATCAGTATCAGAAGCGGTTGTGACCACCAATACTTGCAACAATTGCACTCCTGGTCCTGTTTACCTGATTCAATTCAAGTTTCGGCAACTGGAAATACCACCAAACTACGATGTCAACCATCTGGGTTGCATTGGTGGCTGTGACGAGATTCTTACACAGTTGACAGAAATATGTGGCACAGGCTCTCGCATGCCAGCAAGAGCTCGAGGACCTACTGCACCAACCAGCAACACCAATCAACCAGCAAGAGCTCGAGGACCTACTGCATCAACCAGCAACGCCAATCATACCAACCCAAGGCAAGCTGTTTGTTTGCACTGTCAAGAAACAGGACATTCTTCTAATGAGTGTCCTTCACAGACTCGACGTTCCAGGAATGCCCAATATCCTGGAATGAACCAACAAAGTGGTGAATCTTCTGTTTCATGCAGCTCATGTGGAGCACCATGTGTTTTGCGAACTGCAAATACAGCAAATAACAGGGGCAGGAAGTTCTACTCATGTCAATCACAGGAGTGCAATTTCTTTGTATGGGAGGATAACCTCAACAATGGCAGTGGAGGAAGAAGTTTTACACGTTCAAATAGTAGTACTCCAACACCCAGCCGTGGTCGAAATGGTGGCCGTGGACCTCGTGGTAGGGGACGGAGTGGATCTAATTCTTCTAATGGGACATTTGTGACAGCCACTGGGGATCCTGTTTCTGGTAGAAGGTGCTATACATGTGGTGATCCATCTCATTTTGCTAATGTCTGCCCCAATCGTGGACTCTGA 2799 0.4559 MAGRGITVLNVAEKPSVAKSVSNILSRNQGLRVRDGRSRYNRIFEFNYTIRGQPCNMLFTSVIGHLMELEFDDRYRKWHSCDPADLFQAPVHKSVPEDKKDIKRTLEEEARRCQWLVLWLDCDREGENIAFEVVDVCTAANPRLTIKRARFSALIDREIHQAVQNLVEPNKWFADAVDARQEIDLRIGASFTRFQTMLMKDAFVIDTVTDGRNIVLSYGPCQFPTLGFVVERYWEIQAHEPENFWSINCSHRSEEGVATFNWGRGHLFDYTYAVIIYEMCIEEPTATVTNVRQQEKLKYPPHPLSTIELEKRASRYFRMSSEHTMKVAEELYQGGFISYPRTETDNFSSRTDLHAIVQEQQGHPEWGTYAQRLLDPGAGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSQDHRRLYELVVRHFLACVSKPAVGAETTVEIDIAGELFSACGRVILEKNYLDVYPYESWGGSMIPPYTIDQQFIPTTLTLDPGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDASMRFTPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKSVSEGTKSKAEVLDTSLQQMKDCFLDARLNKVKLLEAMAIFFERSNRVGSEEQNATGEVVRRCGLCQESDMVLKKNRDGNFMVGCLGYPQCRSVVWLPGSVSEAVVTTNTCNNCTPGPVYLIQFKFRQLEIPPNYDVNHLGCIGGCDEILTQLTEICGTGSRMPARARGPTAPTSNTNQPARARGPTASTSNANHTNPRQAVCLHCQETGHSSNECPSQTRRSRNAQYPGMNQQSGESSVSCSSCGAPCVLRTANTANNRGRKFYSCQSQECNFFVWEDNLNNGSGGRSFTRSNSSTPTPSRGRNGGRGPRGRGRSGSNSSNGTFVTATGDPVSGRRCYTCGDPSHFANVCPNRGL* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3180 932 Gene3D Bacterial Topoisomerase I, domain 1 625 673 - -
Tpr3g3180 932 ProSiteProfiles Toprim domain profile. 7 152 IPR006171 -
Tpr3g3180 932 Pfam Topoisomerase DNA binding C4 zinc finger 637 674 IPR013498 GO:0003677|GO:0003916|GO:0005694|GO:0006265
Tpr3g3180 932 SMART c2hcfinal6 913 929 IPR001878 GO:0003676|GO:0008270
Tpr3g3180 932 SMART c2hcfinal6 778 794 IPR001878 GO:0003676|GO:0008270
Tpr3g3180 932 SUPERFAMILY Retrovirus zinc finger-like domains 763 801 IPR036875 GO:0003676|GO:0008270
Tpr3g3180 932 CDD TOPRIM_TopoIA_TopoIII 7 166 IPR034144 -
Tpr3g3180 932 Gene3D Topoisomerase I, domain 2 176 600 IPR013824 -
Tpr3g3180 932 Gene3D - 3 169 - -
Tpr3g3180 932 ProSitePatterns Prokaryotic DNA topoisomerase I active site. 329 343 IPR023406 GO:0003917
Tpr3g3180 932 Pfam GRF zinc finger 817 856 IPR010666 GO:0008270
Tpr3g3180 932 MobiDBLite consensus disorder prediction 737 770 - -
Tpr3g3180 932 ProSiteProfiles Zinc finger CCHC-type profile. 912 929 IPR001878 GO:0003676|GO:0008270
Tpr3g3180 932 PRINTS Prokaryotic DNA topoisomerase I signature 116 129 IPR013497 GO:0003677|GO:0003916|GO:0006265
Tpr3g3180 932 PRINTS Prokaryotic DNA topoisomerase I signature 216 234 IPR013497 GO:0003677|GO:0003916|GO:0006265
Tpr3g3180 932 PRINTS Prokaryotic DNA topoisomerase I signature 334 343 IPR013497 GO:0003677|GO:0003916|GO:0006265
Tpr3g3180 932 PRINTS Prokaryotic DNA topoisomerase I signature 416 432 IPR013497 GO:0003677|GO:0003916|GO:0006265
Tpr3g3180 932 PRINTS Prokaryotic DNA topoisomerase I signature 514 528 IPR013497 GO:0003677|GO:0003916|GO:0006265
Tpr3g3180 932 PANTHER DNA TOPOISOMERASE 3-ALPHA 7 700 - -
Tpr3g3180 932 MobiDBLite consensus disorder prediction 862 879 - -
Tpr3g3180 932 Pfam Toprim domain 9 153 IPR006171 -
Tpr3g3180 932 PANTHER PROKARYOTIC DNA TOPOISOMERASE 7 700 IPR000380 GO:0003677|GO:0003917|GO:0006265
Tpr3g3180 932 SUPERFAMILY Prokaryotic type I DNA topoisomerase 8 600 IPR023405 -
Tpr3g3180 932 Gene3D - 770 803 - -
Tpr3g3180 932 MobiDBLite consensus disorder prediction 790 811 - -
Tpr3g3180 932 SMART topIaneu2 292 552 IPR003602 GO:0003677|GO:0003916|GO:0006265
Tpr3g3180 932 SMART topIban2 145 246 IPR003601 GO:0003677|GO:0003916|GO:0006265
Tpr3g3180 932 Pfam DNA topoisomerase 170 589 IPR013497 GO:0003677|GO:0003916|GO:0006265
Tpr3g3180 932 Gene3D Topoisomerase I, domain 4 300 430 IPR013826 -
Tpr3g3180 932 ProSiteProfiles Zinc finger CCHC-type profile. 779 794 IPR001878 GO:0003676|GO:0008270
Tpr3g3180 932 SMART toprim5 7 142 IPR006171 -
Tpr3g3180 932 Gene3D Topoisomerase I, domain 3 240 498 IPR013825 -
Tpr3g3180 932 MobiDBLite consensus disorder prediction 746 770 - -
Tpr3g3180 932 MobiDBLite consensus disorder prediction 862 903 - -
Tpr3g3180 932 CDD TOP1Ac 173 600 IPR013497 GO:0003677|GO:0003916|GO:0006265
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3180 Tpr-Chr3 35020078 35037794 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3180 K03165 - jre:109018851 1511.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3180 3 35020078 35037794 Tpr3g3180 3 35020078 35037794 ECH