Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3151 ATGCCGACCGAAATGCCTGAAGGATTACCCTTCTCAGTAGACACATGGACTCCATCTTCAAAGAGCAGTAAAAGACACCATTTCCTAACTCACGCTCACAAAGACTATTCCTCAAACATCATTTCCAACTCCTCTTTCCCTATTTACTCTACTCTTCTCACCAAAACCCTTCTCCTTCAACATTACCCTAAGCTTGATCCTTCCTTGTTTCTGCAAATTGAAGTCGGTCAATCCTTCGTCATCGATGATCCTGACGGAAACTTCACTGACACCGCTTTCGATGCCAATCACTGTCCTGGGGCGGTGATGTTCTTGTTTGAAGGAAAATTTGGTAATATCTTACACACAGGAGATTGCAGGCTAACTCTTGAATGTTTGCTCAACTTACCTGACAAGTATGTAGGGAGGAAGGGGAAAAAGCCACAATGTCCTCTTGATTGTGTTTTCTTAGACTGTACTTTTGGAAATTTTTCTCGTTCAATGCCTACCAAGCATTCATCTATTCAACAGGTTGTTAATTGTATATGGAAGCATCCTGACGCATCGACAGTGTATCTTACCTGTGATGTCCTCGGTCAGGAAGACATCCTTGTTCAAGTGTCCCAAATATTTGGAGCCAAGATATATGTCGATAAAACCAAATATCCAGAATGTTTCAAGAATCTAGCAGTTACGGTGCCTGAAATCCTTGGTGAAGATCCATCTTCTCGTTTCCATTTATTTGATGGATCTCCAGGACTATATGAAAGAGCACAAGCAAAACTGGTTGAAGCCAAGGCAGCTTTCCAGACTGAACCTCTCGTTGTCCGCCCTTCTGCTCAGTGGTATGCTTGTGAAGAGCTCTCAGATGTTCAAAACAATAGAAAAAAGAGGATGAATGAAGCAGTTAAGGATCAATTTGGTGTTTGGCATGTCTGTTACTCAATGCACTCATCCAAGGAAGAATTGGAAAAGGCACTTCAACTTCTTGCTCCGAGGTGGGTTGTTTCAACAACCCCTCCCTGTAGGGCTATGGAGCTTAATTATGTTAAGAAATACTGTTTTAACTCTAAAGCTGGTCTCAATAACTCTGTGCTGAAGCTTCTGGATATGACTGTGGTAACTTCTGATGACGTTGATGCATTTGTCAAACCTGTAAACTGTTATCCTGTGCTTGAAGGGACCCCTCAGCCATGTCCGAACACTAAATCACCCGTCAAGCAGTGCACTGCTGCAAAAGCACTAGAAGAATTGTCTCTTCCTAGTAATCGCTCGCCTGTCACATTATTTGGAAGAGCAAGGCTTGGTCTCCAAGCTGTTGACTTTTTACGAGGAGGGTGTAATATTTTGCCGGGTAATCTCCCTTTGCAAACAGTTTCAAGTGATGCAAGACAAGAATTCTTGGATGCTGCTGCTGAAGTGAAACGGGAGAGGTCACCAGGAATAAAGGAAAATTTACACAATGTGAATGATTATCAGCAATCCGAGGTTCAGGAAAACACAAGAGTTCATAAGAGTGACTCTTGCGAAAATAGTGGATCCCCTGGCTTGAGTGAACATGTCAGAAAGTATTACAGGTCAATGAATCTTCCTATTCTTCGACCTCTTCCCTCATTAGTGGATCTTATGAATTCAAGGAAACGTGCCAAGATGGGAACCGATCATTGA 1647 0.4256 MPTEMPEGLPFSVDTWTPSSKSSKRHHFLTHAHKDYSSNIISNSSFPIYSTLLTKTLLLQHYPKLDPSLFLQIEVGQSFVIDDPDGNFTDTAFDANHCPGAVMFLFEGKFGNILHTGDCRLTLECLLNLPDKYVGRKGKKPQCPLDCVFLDCTFGNFSRSMPTKHSSIQQVVNCIWKHPDASTVYLTCDVLGQEDILVQVSQIFGAKIYVDKTKYPECFKNLAVTVPEILGEDPSSRFHLFDGSPGLYERAQAKLVEAKAAFQTEPLVVRPSAQWYACEELSDVQNNRKKRMNEAVKDQFGVWHVCYSMHSSKEELEKALQLLAPRWVVSTTPPCRAMELNYVKKYCFNSKAGLNNSVLKLLDMTVVTSDDVDAFVKPVNCYPVLEGTPQPCPNTKSPVKQCTAAKALEELSLPSNRSPVTLFGRARLGLQAVDFLRGGCNILPGNLPLQTVSSDARQEFLDAAAEVKRERSPGIKENLHNVNDYQQSEVQENTRVHKSDSCENSGSPGLSEHVRKYYRSMNLPILRPLPSLVDLMNSRKRAKMGTDH* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3151 548 PANTHER DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN 1 449 - -
Tpr3g3151 548 PANTHER DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN 484 545 - -
Tpr3g3151 548 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 484 545 - -
Tpr3g3151 548 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 1 449 - -
Tpr3g3151 548 Pfam DNA repair metallo-beta-lactamase 229 335 IPR011084 -
Tpr3g3151 548 Gene3D - 160 310 - -
Tpr3g3151 548 Gene3D - 8 331 IPR036866 -
Tpr3g3151 548 SUPERFAMILY Metallo-hydrolase/oxidoreductase 25 338 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3151 Tpr-Chr3 34741526 34744818 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3151 K15340 - gmx:100807948 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3151 3 34741526 34744818 Tpr3g3151 3 34741526 34744818 ECH