Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3138 ATGGCTTCTAATATCAACTTGTCACTATTTCTCCTCCTCTTCCTAGCACACTATGCATTTGTTAATGGAGATGCAACTTTGATCAAAAGCACTTGCAAGAACACCAAGTACTACAATCTATGTTTCTCTTCCCTCAAATCCAATCCTAGCAGTCCAAATGCAGACACAAAGGGCTTAGCTGTGATCATGGTTGGAATTGGAATGACAAATGCTACTTCCACTTCTTCATATTTGTCTTCTAAGTCTCTTACTCCTACCAACAACAACACTTTGAAAAGTGTTCTCAAAGAGTGTGCAGATAAGTACTCTTATGCTAGTGATTCACTCCAAGCTTCAGTGCAAGATTTGGCTAATGAAGAATATGATTATGCTTATATACACATCACTGCAGCCAAAGATTATCCAAATGTTTGTCATAATGCATTCAAAAGGGTTCCTGATTTAGTTTACCCTCATGAACTTGCTAGTAGAGAAAATGGTTTGAAGCATATTTGTGATGTGGCTATGGGGATTATTGATAATCTCATCAATTTGTAG 537 0.3724 MASNINLSLFLLLFLAHYAFVNGDATLIKSTCKNTKYYNLCFSSLKSNPSSPNADTKGLAVIMVGIGMTNATSTSSYLSSKSLTPTNNNTLKSVLKECADKYSYASDSLQASVQDLANEEYDYAYIHITAAKDYPNVCHNAFKRVPDLVYPHELASRENGLKHICDVAMGIIDNLINL* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3138 178 SMART PMEI_2 23 171 IPR006501 GO:0004857
Tpr3g3138 178 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 175 IPR035513 -
Tpr3g3138 178 Pfam Plant invertase/pectin methylesterase inhibitor 27 170 IPR006501 GO:0004857
Tpr3g3138 178 PANTHER CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2 10 175 - -
Tpr3g3138 178 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 176 IPR035513 -
Tpr3g3138 178 CDD PMEI_like 32 174 - -
Tpr3g3138 178 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 175 - -
Tpr3g3138 178 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 175 IPR006501 GO:0004857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3138 - - gmx:100306461 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3138 3 34616511 34617186 Tpr3g3138 3 34616511 34617186 ECH