Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3135 ATGAATATGAGAGGAACAATGGGACACCGTTTGCCAGCATCCATTGAAGATTTATACAAGAGAAAAGTGCAAAGAAGTAAAACAAAAGATGTAGAGAAGCCTTTCCACTTATCTATCCAAGATAGGAGCTCAAGATGCAAGTTTTCTTTTTTAAAACTTATCTTAGTGGTAACCATTTCTGCCACTTTTGTAATGCTCCTATACTCTCCAGAAGTTTACAGTACCAGAAATTTATCAGGCTCTGGCTCAAGGTGGATATGGGGTGGCTCAGATCCTCGGTACATTTCAAATATAGATACTGATTGGGATGATATAATGAAAATAACAGAGAAAATGACAGGAAAGAATGAATTTCAAGGCATCGGACTTGTAAATTTCAACAACACTGAGATTTCTAACTGGAAGCGTAATTTTCATGATACCACACATTTTGTTCTACATCTGGAGCATGCTGCAAACAACGTTACATGGGAGTCTCTATATCCAGAATGGATTGATGAAGAAGAAGAAACTGAAGTTCCTGTTTGTCCTTCTCTACCAAGTCTTGTATCTCCTGGTACAAGACTCAATCTCATTGCTGTCAAGCTTCCTTGTAGGAATGGAGACAACTGGTCTAGAGATGTCGCTCGTTTGCACCTGCAGCTTGCAGCTGCTGGACTTGCTACCTCTTTCAAAGGAAATTACCCCGTTTATGTGCTCTTCATTACCAACTGTTTTCCGATACCAAATCTGTTTACCTGCAAAGAACTAATTGGACGTGAAGGAAATGTATGGTTATACAGACCAAACTTGAGTATTTTGAGAGAAAAGGTTCAGCTTCCAGTTGGCTCATGTGAACTTGCACTTCCTATGAGAGGCAAAGAACTGGTTTACAATGGAAATGCTCCAAGAGAAGCCTATGCAACAATTCTGCATTCAGCTCATGTTTATGTCTGTGGAGCCATAGCTGCAGCACAAAGCATCCGAATGTCAGGATCGAGAAGAGACCTTGTAATACTTGTTGATGAGACAATCAGTGAATATCACAAAAGTGGTTTGGAAGCAGCAGGGTGGAAGGTTAGAAAAATCCAGAGGATCAGAAACCCCAAAGCTGAAAAAGATGCTTACAATGAATGGAACTACAGCAAATTCAGGTTATGGCAGTTGACAGATTATGACAAGATAATATTTATTGACGCAGATTTGCTCATACTCAGAAACATAGATTTTCTATTTGGAATGCCAGAAATCACTGCTACCGGTAACAATGCCACGCTTTTCAACTCAGGTGTCATGGTGGTGGAGCCATCAAACTGCACATTTCAGCTCCTGATGGATCATATTAATGAGATTGAGTCCTACAATGGAGGGGACCAAGGGTATTTGAATGAAATATTTACATGGTGGCACAGGATACCAAGACACATGAACTTCTTGAAGCATTTTTGGATTGGTGATGAGGAAGAGAAGAAGCAAATGAAAACCATGTTGTTTGGTGCTGAGCCACCAATTCTTTACGTGCTTCACTATCTAGGTTTGAAGCCATGGTTATGCTTCAGGGACTATGATTGTAACTGGAATTTTGATATATTTCATGAGTTTGCAAGTGATGTAGCACATGCAAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGCTTTTACAGCAGTTTTGTCTGTTGCAGTCAAAGCAGAAGGCACAATTGGAGTGGGATCGGAGCCAAGCTGAAATAGCAAACTACACAGACGGGCATTGGCGAATCAAAGTTAAAGATCACCGCTTGACGAAGTGTATAGATAATCTGTGTGACTGGAAAAGCATGTTGCGGCATTGGGGAGAGAGTAACTGGACAGATGATGAGTTTTTTACTCCAACACCTCCCACAGTTGCCACATCATCTCTTTCTGCGTTATGA 1893 0.4083 MNMRGTMGHRLPASIEDLYKRKVQRSKTKDVEKPFHLSIQDRSSRCKFSFLKLILVVTISATFVMLLYSPEVYSTRNLSGSGSRWIWGGSDPRYISNIDTDWDDIMKITEKMTGKNEFQGIGLVNFNNTEISNWKRNFHDTTHFVLHLEHAANNVTWESLYPEWIDEEEETEVPVCPSLPSLVSPGTRLNLIAVKLPCRNGDNWSRDVARLHLQLAAAGLATSFKGNYPVYVLFITNCFPIPNLFTCKELIGREGNVWLYRPNLSILREKVQLPVGSCELALPMRGKELVYNGNAPREAYATILHSAHVYVCGAIAAAQSIRMSGSRRDLVILVDETISEYHKSGLEAAGWKVRKIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNATLFNSGVMVVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKQMKTMLFGAEPPILYVLHYLGLKPWLCFRDYDCNWNFDIFHEFASDVAHAKWWKVHDAMPELLQQFCLLQSKQKAQLEWDRSQAEIANYTDGHWRIKVKDHRLTKCIDNLCDWKSMLRHWGESNWTDDEFFTPTPPTVATSSLSAL* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3135 630 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 296 545 IPR029044 -
Tpr3g3135 630 SUPERFAMILY Nucleotide-diphospho-sugar transferases 297 543 IPR029044 -
Tpr3g3135 630 PANTHER GLYCOGENIN SUBFAMILY MEMBER 13 607 - -
Tpr3g3135 630 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 13 607 - -
Tpr3g3135 630 CDD GT8_Glycogenin 298 543 - -
Tpr3g3135 630 Pfam Glycosyl transferase family 8 304 510 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3135 Tpr-Chr3 34575492 34581336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3135 5 630 Glycosyltransferase AT3G18660 65.474 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3135 K20890 - gmx:100780439 1164.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3135 3 34575492 34581336 Tpr3g3135 3 34575492 34581336 ECH