Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3134 ATGACGAAGTTCAGGAAGCTAAGTCGAGACACGGCTCATCGAATGTCCATGCTTAGAACCATGGTCTCGCAGTTAGTGAAGCATGAGCGTATCGAAACTACTATTAGCAAGGCTAAGGAGATTAGACGGCTTGCGGATAGAATGGTAACACTTGGTAAAGAGGGGTCCGTATGTGCTGCAAGGCGTGCTGCTGGTTTCGTGCGAGGAGACGATGTCCTTCACAAGCTGTTTACAGAACTGGCTTATCGATATAAGGATAGAACTGGTGGATACACCAGGGTGCTTCGGACTCGTATTCGAGTTGGTGATGCTGCACCGATGGCCTATATTGAGTTAATTGATCGAGAAAATGAGCTTAGGCAGTCAAAGCCACCAAATCCTCAACCACCACAGAGACCACCCCTTGATCCTTGGGCTAAATCTCGTCTCTCCAGGCAGTATGCATCTCCCAAAGCTGATAAATCCGATTCTGATTTGTGA 480 0.4771 MTKFRKLSRDTAHRMSMLRTMVSQLVKHERIETTISKAKEIRRLADRMVTLGKEGSVCAARRAAGFVRGDDVLHKLFTELAYRYKDRTGGYTRVLRTRIRVGDAAPMAYIELIDRENELRQSKPPNPQPPQRPPLDPWAKSRLSRQYASPKADKSDSDL* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3134 159 Hamap 50S ribosomal protein L17 [rplQ]. 2 113 IPR000456 GO:0003735|GO:0005840|GO:0006412
Tpr3g3134 159 PANTHER RIBOSOMAL PROTEIN L17 1 158 IPR000456 GO:0003735|GO:0005840|GO:0006412
Tpr3g3134 159 PANTHER BNAA09G06940D PROTEIN 1 158 - -
Tpr3g3134 159 TIGRFAM L17: ribosomal protein bL17 4 114 IPR000456 GO:0003735|GO:0005840|GO:0006412
Tpr3g3134 159 Pfam Ribosomal protein L17 17 113 IPR000456 GO:0003735|GO:0005840|GO:0006412
Tpr3g3134 159 Gene3D Ribosomal protein L17 1 113 IPR036373 GO:0003735|GO:0005840|GO:0006412
Tpr3g3134 159 SUPERFAMILY Prokaryotic ribosomal protein L17 3 116 IPR036373 GO:0003735|GO:0005840|GO:0006412
Tpr3g3134 159 MobiDBLite consensus disorder prediction 117 159 - -
Tpr3g3134 159 ProSitePatterns Ribosomal protein L17 signature. 31 53 IPR000456 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3134 Tpr-Chr3 34567832 34571858 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3134 K02879 - gmx:100785280 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3134 3 34567832 34571858 Tpr3g3134 3 34567832 34571858 ECH